Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2012 |
Symbol | |
ID | 1183657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2198423 |
End bp | 2198959 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637393390 |
Product | hypothetical protein |
Protein accession | NP_791835 |
Protein GI | 28869216 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA ACAAGTCCAC GGATGTCGCT GCGCGCACCC AACTAGAAAA AAACGGCCCC GAAAACGCAA GCATTGTTCA AGAAGCTCCA CTACACGAGA GTCTCTATCG ACAGGCGATT GCTGTGCACA TTCCATCCGA TATTTCAGAC ACATTGAAAG CGCCTGTGCT GCCCAACAAC GACCCTGCGG CCATCAGTCA TGAACAGGCA CATGCAGGTA TCACCGTCCA CATTCCCGGT TCCGTCAAGA TGTGCTGGGG AGATGGCATT CATTTCTACT GGGGTAAAAA CGTATCGACC ACAACGCTTT TCCATCGAGT AGGCGAGAAT AGCGTGGTGC GCGAGCTGTG TGTTTCCTAC CTGTTCACGC CCCACATTCA GTACGGCCTG ATCGACCTGT ATTACGAGCT CTACCGCGAT TGTCGACTGA TCGGCACATC ACCGGTGCTG CGTGTGAACG TCAATTACTC GGTACCTGTG ACCTCCAGGC AGCGCAGCCG CAAACGCCTG ATCAATCGCA GGTTTCCAGA CAAATAA
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Protein sequence | MDKNKSTDVA ARTQLEKNGP ENASIVQEAP LHESLYRQAI AVHIPSDISD TLKAPVLPNN DPAAISHEQA HAGITVHIPG SVKMCWGDGI HFYWGKNVST TTLFHRVGEN SVVRELCVSY LFTPHIQYGL IDLYYELYRD CRLIGTSPVL RVNVNYSVPV TSRQRSRKRL INRRFPDK
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