| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1985 |
|---|
| Symbol | |
|---|
| ID | 1183630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2171322 |
|---|
| End bp | 2172209 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637393363 |
|---|
| Product | motB protein |
|---|
| Protein accession | NP_791808 |
|---|
| Protein GI | 28869189 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCC GACGTCAGCC CGAAGAACAC GAAAATCATG AACGCTGGCT GGTGTCTTAC
GCCGACTTCA TCACCTTGCT GTTCGCCTTT TTCGTGGTGA TGTACTCGAT CTCCTCGGTC
AACGAAGGCA AGTACAAAAT TCTCTCCCAA GCGTTGGTCG GCGTGTTCAA CGACACCGAA
CGGACCATGA AGCCGATCCC CATCGGCGAA CAGCGCCCGG TGTCGGTCAA GCCCGCCGAG
CCCTTGGTCA AAGACAGCGA GCAGACCGAT GCCGGTATCG GTCAGGCTTC CGATGACCCG
TTGCAGACCA TTGCTCAGGA TGTGCGCGAT GCGTTTGGTG ATCTGATCAA GTCCGACCAG
ATGACCGTGC GTGGCAACGA GTTGTGGATC GAGATCGAGC TCAATTCCAG CCTGTTGTTC
GTCAGCGGCG ATGCCATGCC CAGCGACAAG GCCTTCACCA TCATCGAAAA GGTCTCGGGC
ATCGTCAAAC GGTTCGATAA CCCGATTCAT GTTGAAGGCT TTACCGACGA CCAGCCGATC
AGCACTGCAC AGTTTCCGAC CAACTGGGAG CTGTCGTCGG CGCGCTCTGC CAGCATTGTG
CGCATGTTGG CCATGGACGG TATCAATCCG GCGCGGCTTG CGTCGGTAGG CTACGGTGAG
TTTCAGCCCA TCGCCCCCAA CACCACGGCA GCCGGACGCG CCAAGAACCG TCGTGTGGTG
CTGGTGATCT CGCGAAATCT GGACGTTCGC CGCAGCCTGA CCGGTTCCGG CACGGCCAAT
GCGCAGCCCG ACGCTGCATT ACGCCGTGCT GGCACACAAA CTGCACCGGT GCCAGCAAAG
CCGCCGGTAC GCGCGAACGC CGTCAATTCT CCGTCACCCG CCCCCTAA
|
|---|
| Protein sequence | MARRRQPEEH ENHERWLVSY ADFITLLFAF FVVMYSISSV NEGKYKILSQ ALVGVFNDTE
RTMKPIPIGE QRPVSVKPAE PLVKDSEQTD AGIGQASDDP LQTIAQDVRD AFGDLIKSDQ
MTVRGNELWI EIELNSSLLF VSGDAMPSDK AFTIIEKVSG IVKRFDNPIH VEGFTDDQPI
STAQFPTNWE LSSARSASIV RMLAMDGINP ARLASVGYGE FQPIAPNTTA AGRAKNRRVV
LVISRNLDVR RSLTGSGTAN AQPDAALRRA GTQTAPVPAK PPVRANAVNS PSPAP
|
|---|
| |