Gene PSPTO_1941 details

Gene Information

• Locus tag: PSPTO_1941
• Symbol: flgH
• ID: 1183586
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2120963
• End bp: 2121676
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637393319
• Product: flagellar L-ring protein FlgH
• Protein accession: NP_791764
• Protein GI: 28869145
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGCC CTGGTTTTCC GCGTTTTTCA GTGTTGATCG CTTCATTGTG CGGGATCACC 
CTGCTGTCTG GCTGTGTTGC GCCGACGGCC AAGCCCAATG ACCCTTACTA CGCTCCGGTG 
TTGCCGCGTA CGCCCATGTC GGCCGCTTCG AACAATGGCG CTATCTATCA GGCCGGCTTC 
GAGCAGAACC TGTACGGCGA CCGCAAGGCG TTCCGCGTCG GCGACATCAT CACCATCACG 
CTCTCCGAGC GCATGGCAGC GAGCAAGGCG GCGACCTCGG CAATGAGCAA GGACAGCACC 
AACAGTATTG GTCTGACCTC GCTGTTCGGT TCGGGCCTGA CCACCAACAA CCCGATTGGC 
GGCAACGACC TGAGCCTCAG CGCAGGCTAC AACGGCGCCC GCACCACCAA GGGTGACGGC 
AAGGCCGCGC AGAGCAACAG CCTGACCGGC TCGGTTACCG TGACCGTTGC GGATGTGCTG 
CCCAACGGCA TTCTGTCCGT GCGTGGCGAG AAGTGGATGA CGCTCAATAC CGGTGACGAA 
CTGGTACGCA TTGCCGGCCT GGTGCGCGCC GATGACATCG CAACCGACAA CACGGTGTCT 
TCTACCCGTA TTGCCGATGC ACGTATTACC TATTCGGGGA CCGGAGCCTT TGCCGATACC 
AGCCAGCCAG GCTGGTTCGA CCGGTTCTTC CTCAGCCCGT TGTTCCCTTT CTGA 

 

Protein sequence

MNRPGFPRFS VLIASLCGIT LLSGCVAPTA KPNDPYYAPV LPRTPMSAAS NNGAIYQAGF 
EQNLYGDRKA FRVGDIITIT LSERMAASKA ATSAMSKDST NSIGLTSLFG SGLTTNNPIG 
GNDLSLSAGY NGARTTKGDG KAAQSNSLTG SVTVTVADVL PNGILSVRGE KWMTLNTGDE 
LVRIAGLVRA DDIATDNTVS STRIADARIT YSGTGAFADT SQPGWFDRFF LSPLFPF