| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1939 |
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| Symbol | flgF |
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| ID | 1183584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2119303 |
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| End bp | 2120043 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393317 |
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| Product | flagellar basal-body rod protein FlgF |
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| Protein accession | NP_791762 |
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| Protein GI | 28869143 |
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| COG category | [N] Cell motility |
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| COG ID | [COG4787] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.960389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGACAAGT TGCTTTACGT CGCCATGAGC GGTGCATCCG AAAACGCGAT TGCGCAGAAG
GCTCACGCCA ACAACCTGGC AAACGTTTCG ACCAATGGCT TCATGCGTGA CCTTGAACAG
GCCCGCTCGA TGCCGGTGTT TGGCGAGGTC ATGCCGTCGC GTGCCTACGC CATGAGCGAG
CGTCCGGGTA CTGACTTCTC CGGTGGCGCG ATGGTCGAGA CCGGCCGCGA ACTGGACATC
GCCATCAAGG GCGATGGCTG GATTGCCGTG CAGACTCCCG ACGGTGGCGA AGCCTACACA
CGCAGCTCCG GCATGAACAT CGATGCCCTG GGCGTGTTGC GCGACGGCAG TGGTTTGCCG
GTAATGGGCA ACGGCGGTCC GATTGCCGTG CCGCCGCAGC AGCAGATCGA GATCGGCGCC
GACGGCACAA TCAGCATTCG CTCGCTGGGC GAGAGCCCGC AGGTAATGGC GCAGGTCGAC
CGTATCAAGC TGGTCAAGCC TGACCTCAAG ACCATGGAAA AAGGCCCCGA TGGCCTGATC
CACACCAAGA GCGGCCGGCC TGCCGATGCA GACGCCACCG TTCAGGTCGA GTCCGGCTTT
CTGCAGGCGA GCAACGTCAA TGCGGTCGAG GAAATGACTT CGGTGCTGGC CTTGTCCCGT
CAATTCGAAT TGCACGTCAA GATGATGAAG ACCGCCGAAG AAGACGACCA GTCGATGGCT
CGCGTCTTGC AACTTGGCTA A
|
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| Protein sequence | MDKLLYVAMS GASENAIAQK AHANNLANVS TNGFMRDLEQ ARSMPVFGEV MPSRAYAMSE
RPGTDFSGGA MVETGRELDI AIKGDGWIAV QTPDGGEAYT RSSGMNIDAL GVLRDGSGLP
VMGNGGPIAV PPQQQIEIGA DGTISIRSLG ESPQVMAQVD RIKLVKPDLK TMEKGPDGLI
HTKSGRPADA DATVQVESGF LQASNVNAVE EMTSVLALSR QFELHVKMMK TAEEDDQSMA
RVLQLG
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