| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1917 |
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| Symbol | |
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| ID | 1183562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2096418 |
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| End bp | 2097665 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393295 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_791740 |
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| Protein GI | 28869121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.405488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCT CAACCGAGCG GCCCGCGCTA CCACTGAATG AGTGCGACCC TCACTGGCTT
CGCAATTTAT GGGTGTGTGT ATTCGGTGTG TTTACGACCA TCGTTGCCAT GACTCTACTG
CTGCCGTTCC TACCGCTGTA TGTGGAACAA CTGGGAGTCG ATAATCACGC TGCGGTGGTA
CTTTGGTCGG GGGCGACATA CGGGGCAACA TTCCTGTCTG CCGCGATAAC GGCCCCTTTA
TGGGGGCGCC TCGGTGATCG TTACGGGCGT AAGCTGATGT TAATCCGTGC CAGCCTGGGC
ATGGCCGTGG CAATGTCCTT GATTGGTTTA GCGCAAACGG TGTGGCAGTT GTTATTGCTG
AGGCTTCTGG CCGGCTTGCT GGGCGGGTAC GCCTCAGGTG CAACCATATT GGTCGCCACG
CAAACGCCCA AGGCGCGTTC TGGCTGGGCA CTGGGTGTTT TGTCATCAGG AATTATGGCC
GGAAGCCTGG CCGGGCCTTT GATGGGTGGT GTGTTGCCGC CGCTGATAGG TATCCGCAAC
ACCTTTTTTT TAGCAGGAGG TGTGATTTTC ATCACTTTTC TTGCAACCCT GTTGTTGCTG
CGTGAAATGC CGCGCAAAGC TCCTTCGCGG GCAACTGATA GTGCGTTGCC AGCAGTGGTG
AAGCTCAGCG GCGAGCAGCG ACGAATGATC ACCTGTATGT TTGTCGTCGC CAGCCTGGTG
ATGTTCTCGA CCATGTCAGT CGAGCCGATC ATTACGGTTT ACCTCAGGCA ATTGAAGACT
GATAACGTGA CGATGATGGC TGGCGTGGTC ATGTCGGCCA CAGCACTGGG TAGCATTCTT
GCGGCGTCGC GGCTGGGTCG TTTGGCAGAC CGAATCGGTT ATCTACCGGT GCTGACCAGC
TGCCTGGCCA TGACAGCGCT TACCCTGATC CCTCAAGCAT GGGTCAGCAA CGTCTGGCAA
CTGGCAGCAT TGCGTTTCTT CATGGGCCTT GCACTGGGAG GCTTGCTGCC CTGCGTCGCG
GCTATTATCC GTCACACCGT ACCCAATGAA GTCGCTGGTC GAATGCTGGG CTACTCCACG
TCCAGCCAGT ATCTTGGGCA AGTGCTCGGG CCGTTGGCCG GCGGGCTATT GGGCGGGTAC
TTGGGCATAG GCAGCGTATT TTTAGGGACT GCCATGGTGC TCGCTGCCTG TTCGATCATG
GTCGGCAGAA TGGACATGAT ACGCACACCT GCCTCAAGCA AGCTTTGA
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| Protein sequence | MSSSTERPAL PLNECDPHWL RNLWVCVFGV FTTIVAMTLL LPFLPLYVEQ LGVDNHAAVV
LWSGATYGAT FLSAAITAPL WGRLGDRYGR KLMLIRASLG MAVAMSLIGL AQTVWQLLLL
RLLAGLLGGY ASGATILVAT QTPKARSGWA LGVLSSGIMA GSLAGPLMGG VLPPLIGIRN
TFFLAGGVIF ITFLATLLLL REMPRKAPSR ATDSALPAVV KLSGEQRRMI TCMFVVASLV
MFSTMSVEPI ITVYLRQLKT DNVTMMAGVV MSATALGSIL AASRLGRLAD RIGYLPVLTS
CLAMTALTLI PQAWVSNVWQ LAALRFFMGL ALGGLLPCVA AIIRHTVPNE VAGRMLGYST
SSQYLGQVLG PLAGGLLGGY LGIGSVFLGT AMVLAACSIM VGRMDMIRTP ASSKL
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