| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1911 |
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| Symbol | |
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| ID | 1183556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2091127 |
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| End bp | 2092728 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393289 |
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| Product | response regulator/TPR domain protein |
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| Protein accession | NP_791734 |
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| Protein GI | 28869115 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.014975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGT ACAACCAAAA AAGCTTTCTT ATCGTCGATG ACTTCTCTGA CTTTCGCAGT
TCAGTGAGGT CGATGCTGCG TGAACTGGGC GTCAAGGAAG TGGACACCGC CGACTCCGGT
GAGCAGGCTC TGCGCATGTG CTCGCAAAAG CGTTATGACT TCGTGCTGCA CGACTTCAAC
CTCGGCGATG GCCGCAAGAA CGGTCAGCAG GTGCTCGAAG ACCTGATGAT CGAGCGGCTG
CTGAGTTACG AAAGCGTGTT CATCATGGTG ACTGCGGAAA ACAGTCAGGC GATGGTCATG
AGTGCGCTGG AGTGGGAGCC GGATGGCTAC CTGACCAAGC CGTTCAACCG CGCCGGGCTG
GCCCAGCGCC TGGAAAAGCT GGTACAGCGC AAGACCTTGC TCAAACCGAT TTTGCAGGCC
CTTGATCGTC GCAAGCCGGC CGAGGTGCTG GCGGCCTGCA ACAAGCTGAT CGAGCAGGAC
CCGCGCTACG CGCCGTTGTG CCTGCGCCAC AAGGCTGATG CCTTGCGCGA CCTGAAGCAG
AACGAGCCGC TGGAAGCGTT TCTCAAGACC ATCCTGGCTG ATCGTGCCAC GCCCTGGGCG
TACGGCGCGC TGGGCAGCCT GCTGCTCAAA CGCGGCAAAA CCGCCGAGGC GCAGGCCGTT
TACGAACAGG CCATCAAGGC GTTTCCGACC ATGCCGGCAT TGTTCGACGG TCTGGCTGAT
GTGCTGGTGG CGCTGGGTGA TGGCAAACGG GCGCAAACCG TGCTGGAAAG CGCGGTGCGC
CTGTCGCCGC TGGCGGTGCG CCGGCAGAAG CTGCTGGGCA AGCTGGCGCT CGGCAACGAG
GATTTCGAGA GCGCCTCCAA GGCGTATCGC CAGGCGGTTT CCCAAGGCCA GCATTCGCGC
TTCAAGGACC CGGAGACCAA CCTCGGCCTG GCACACGCGC TGATCAGCAA GGGCGGTGAT
CAGGGGCTCG ATGCACGCAC GCGGGTCGAG ATCAACAACG CCCTTGTCGA CGTCGCCAAG
GAACACACCA ACGACGAAGG CCTGCAAGTG CGCACGCGGC TGATGAAAGC CGCCAGCCTG
CAGCACTCGG ACCCGGAAAC TGCCGCCAGG CTCACCGAGC AGGCGATGGC CAGACTCGAC
GGCATGGAGC AGGTGCTCAG CGCCGACGCT GCGTTGATGG TCGCGGCGCA GCTCAAGCAA
CTGGGGCAGG AAGAAGCTGG CGCCAGTGTC TTGAAGAGCT GCGCACAAGC CTATGGCGAT
GACCCGGCCG TGATGAAAAG CGTGGCCAGC ATGACCGACG ATCCGGCGAT TCTGGAGGCC
AGCAAGGCGG CCGTCGATTT CAACCTGCAG GGCGTACGCA GTTACAAGGC AGGCAACCTC
CCTGAGGCGC AGGCGTTTTT CCGCAGTGCG CTGGGGTTGC AGCCGAAAAA CATCAGTATT
GTGCTGAACA TGGTGCAGTC ACTGCTTCAT CCGGGCCAGA GCCTTGGGCA GGCGGCGATA
GACGAATGCC GTGCCAGCCT GACGACACTG GGCAAGATCC CGGACAGCGA TGCGCGTTAC
GAGCGCTATC AGAAACTCAG GGAGAGGGCA TTTGGCGCAT GA
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| Protein sequence | MLAYNQKSFL IVDDFSDFRS SVRSMLRELG VKEVDTADSG EQALRMCSQK RYDFVLHDFN
LGDGRKNGQQ VLEDLMIERL LSYESVFIMV TAENSQAMVM SALEWEPDGY LTKPFNRAGL
AQRLEKLVQR KTLLKPILQA LDRRKPAEVL AACNKLIEQD PRYAPLCLRH KADALRDLKQ
NEPLEAFLKT ILADRATPWA YGALGSLLLK RGKTAEAQAV YEQAIKAFPT MPALFDGLAD
VLVALGDGKR AQTVLESAVR LSPLAVRRQK LLGKLALGNE DFESASKAYR QAVSQGQHSR
FKDPETNLGL AHALISKGGD QGLDARTRVE INNALVDVAK EHTNDEGLQV RTRLMKAASL
QHSDPETAAR LTEQAMARLD GMEQVLSADA ALMVAAQLKQ LGQEEAGASV LKSCAQAYGD
DPAVMKSVAS MTDDPAILEA SKAAVDFNLQ GVRSYKAGNL PEAQAFFRSA LGLQPKNISI
VLNMVQSLLH PGQSLGQAAI DECRASLTTL GKIPDSDARY ERYQKLRERA FGA
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