| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1897 |
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| Symbol | |
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| ID | 1183542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2072695 |
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| End bp | 2073993 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393275 |
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| Product | BNR/Asp-box repeat protein |
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| Protein accession | NP_791720 |
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| Protein GI | 28869101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4692] Predicted neuraminidase (sialidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.417517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTTA TTTCCCGAAA CCTGACTGCA TGGAGCGCAG GCCTGATTGT TGTAGCGATT
TTTCTCGGCG CATGGCTCAG CCATCCGCTG CACCGTATTT CCGGCTTTGC GGTCACCCCG
GCCCCGGTTG GCACCGAGAG CCTGCCACCC AAGGCTTCCT ATAGTTCGCG CTTTGCGTCC
TCTGACCTGA ACGATTTCGT GCACTCCTCA GCGGTGACGG CGTTGCCCGG CGGCGATCTG
ATGTCGGTGT GGTTTGCCGG TTCCCGCGAG GGCGCAGGAG ACGTGGAAAT CCGCACCTCG
CGCTTCGACG CGCAGGCCGA GGAGTGGGGC GGCGAGCAGG TGCTGGCGAC CCGCGAATCC
ACCCAGACCG GTACCGGCAA GTACATCCGC AAGCTGGGTA ACCCGGTGAT TGCGCTGGCC
CCGGACAACC GCCTGTGGCT GTTCTATGTG TCGGTTTCGG TCGGTGGCTG GGCCGGCAGT
TCGGTCAATG CGATGGTCTC CAGCGACATG GGGGCCAGTT GGTCGGCGCC GCGCCAACTG
GTGACCTCAC CGTTTCTGAA CATCAGCACG CTGGTTCGGG GTGCGCCGGT GTTTCATGCC
GACGGCTCGA TCGGCCTGCC TGTGTATCAT GAGTTTCTCG GAAAGTTTGC TGAATATCTG
TACCTGAGTG CTGACGGCGA GGTGATCGAC AAGTTTCGCA TCAGCCGAGG CAAGAACTCC
CTGCAACCGA CTGTCGTACC ACTCGACGGG CAGCGCGCGG TCGCCTTGCT GCGTTATGCA
GGCGAAACCT TCCACCGCGT GCTGGCGAGC CGCACCGAGG ACGGCGGGCA GACCTGGAGC
GAGCCGTATC CCTTGGCGCC GAGCAACCCT AACTCGTCGC TGGCGGCGGT GGGTGTGCCT
GGCAAGGGCC TGCTGGTGGC GCTCAATGAC CTGCGCGAAG GGCGCTTCAA ACTCAGCCTG
TACAGCACCG ACGAGCAGAT GAAAGTCTGG CGACCGCTGC CTGATCTGGA CAAGTCGCCT
GATCCGCTGG GCACCCCGTT TTCTCTGGAA GTTTATAAAG AGGTCATCGG TCAGGGCTTT
CGGGCTTCCA GTGGCGCACT TCGCCAGCCG ATGGAAGCAG AGTTTCTGAG TAACCTGGAT
CAACGTGTCT GTGCGCCCCA GGGCTGCGAT TTCGAGTACG AGTATCCGTA CTTCATACGT
AGCCCTGACG GTCTGTATCA CCTGGTCTAT TCGTGGAATA ACACCTTTAT CAAACATGTC
AGCTTCAACG AGGCCTGGCT GGCGGAGCAG CTTTTATGA
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| Protein sequence | MRVISRNLTA WSAGLIVVAI FLGAWLSHPL HRISGFAVTP APVGTESLPP KASYSSRFAS
SDLNDFVHSS AVTALPGGDL MSVWFAGSRE GAGDVEIRTS RFDAQAEEWG GEQVLATRES
TQTGTGKYIR KLGNPVIALA PDNRLWLFYV SVSVGGWAGS SVNAMVSSDM GASWSAPRQL
VTSPFLNIST LVRGAPVFHA DGSIGLPVYH EFLGKFAEYL YLSADGEVID KFRISRGKNS
LQPTVVPLDG QRAVALLRYA GETFHRVLAS RTEDGGQTWS EPYPLAPSNP NSSLAAVGVP
GKGLLVALND LREGRFKLSL YSTDEQMKVW RPLPDLDKSP DPLGTPFSLE VYKEVIGQGF
RASSGALRQP MEAEFLSNLD QRVCAPQGCD FEYEYPYFIR SPDGLYHLVY SWNNTFIKHV
SFNEAWLAEQ LL
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