| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1882 |
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| Symbol | |
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| ID | 1183527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2055316 |
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| End bp | 2056473 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393260 |
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| Product | peptidase, M20/M25/M40 family |
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| Protein accession | NP_791705 |
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| Protein GI | 28869086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.237725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATTT CAAAGACACT GATTGACGAA GCAACCGTCT GGCGCCGCAC GATCCACGCT
GCACCGGAGC TTGGTTTTCA AGAGCTGAAA ACCTCCGACA AAGTGGCTGA GCTGCTGACC
GGTTTTGGCC TTGAGGTGCA TCGTGGGCTG GGCGGCACCG GCGTGGTCGG CACTTTGCGC
AACGGCGAGG GCCCGACTAT CGGCATTCGT GCCGACATGG ACGCCTTGCC GATTCAGGAG
CTGGGCGACA GCCTGCACAA GTCGGCCCAC AAGGGCTGCA TGCACGCCTG CGGGCACGAC
GGCCACACGG CGATTCTGCT CGCCACCGCC CGGCACCTGT CGGAAACCCT CCGGTTCGCC
GGCACCGTGC ACTTCGTCTT TCAGCCTGCC GAGGAAAACC TTGGCGGCGC GCAACGCATG
ATCGAAGACG GTCTGTTCGA GCGCTTCCCG ATGGAATCCA TCTACGGCTT GCACAACTGG
CCAGGCGTGC CAGCGGGCAA GGTGGTGATC AATCCCGGGC CGATGATGGC GTCGCTGGAC
ACCTTCGAAA TCACCCTGAC CGGCAAAGGT AGCCATGCGG CCATGCCGGA CAAGGGCAAT
GACCCGATCG TGGCCGCCGC CGAGCTGGTA CTGGGGCTGC AAACCATTGT CTCCCGGCGC
CTGTCGCCAC TGGATTCTGC GGTGGTCAGC ATCACCCAGT TCAATGCCGG CGAGGCCATC
AACGTAATAC CGGAAACCGC GGTGTTGCGC GGCACCGTGC GCTGCCTGCA AACGCCGGTG
CGCGAAAAGG TCCAGCAACT GATCGGCGAA TTCGTCGAGC GTCTGCCGAC GGCTTTTGGC
GTACGTGGCG AACTGGTCTA CAACGTCGGT TACCCGGTGA CCGAAAACCA CGTCGAAGCC
GCCGCCACGA TTCGCCGTGC AGCGATTGCG GCCGTGGGCG AAGTCAACGT GCAGTGGGGC
TGCAACCCCT CCATGGCCTC CGAAGACTTC GCTTTCATGC TGCACGCCTG TCCGGGTGCC
TACATCTGGA TGGGCGTCGA TGGCGAAAAA CCGTCAGCGG CGCTGCACAA CCCCTACTAC
GACTTCAACG ACCAGGTGAT TGAGCCGGGT GTCGCGGTCT GGACTTCGCT GGTGGAGCAG
TGTTTGCCGG TGAGTTGA
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| Protein sequence | MPISKTLIDE ATVWRRTIHA APELGFQELK TSDKVAELLT GFGLEVHRGL GGTGVVGTLR
NGEGPTIGIR ADMDALPIQE LGDSLHKSAH KGCMHACGHD GHTAILLATA RHLSETLRFA
GTVHFVFQPA EENLGGAQRM IEDGLFERFP MESIYGLHNW PGVPAGKVVI NPGPMMASLD
TFEITLTGKG SHAAMPDKGN DPIVAAAELV LGLQTIVSRR LSPLDSAVVS ITQFNAGEAI
NVIPETAVLR GTVRCLQTPV REKVQQLIGE FVERLPTAFG VRGELVYNVG YPVTENHVEA
AATIRRAAIA AVGEVNVQWG CNPSMASEDF AFMLHACPGA YIWMGVDGEK PSAALHNPYY
DFNDQVIEPG VAVWTSLVEQ CLPVS
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