| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1880 |
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| Symbol | |
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| ID | 1183525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2052948 |
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| End bp | 2053790 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637393258 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | NP_791703 |
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| Protein GI | 28869084 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0467601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGA CGCTTGCGAG CAAGGGCTTT GATGTCAGTG GCTTCGACTT GTCGTCGGCT
GCGCTGTCCC AGGCCGAGAG CAAAGGCGTC AAGCCGGTTG CCGAGCGCAA GCAACTGATT
CAGAGCGTGG ACATCCTGAT CCTGTCGCTG CCCAAGGCCG AGCATGTGGA GTCGGTGTGT
CTGGGTGCAG GCGGCATCAG CGAATGGGGT CACGAGGGGC TGATCGTGGT CGATACCACC
ACCTCGACGC CGGAAATGAG CCGCAAGGTG GCTGCCGAAC TGGCGAAAAC CGGCATCGCG
TTTATTGACG CGCCGGTCTC GGGCGGCCCG AAAGGTGCTG CCACCGGCAC CATGTCGATG
GTCATCGGTG CTGAAGATGC CGACCTTGCC CGCGCCATGC CGGTGCTGGA AGGCATGAGC
GGCACGCGGG TGCATGTCGG GCAATGCGGC GCGGGCAACG TGGCCAAGAT CGCCAACAAC
ATGCTTGCCG CCTGCCACCT GATCAGCACC GCCGAGGCCG TAGCGATGGC AGCGCGCGCG
GGCGTCGACC CGGAAAAACT CCTGCAAGGC CTCAACGCCG GCTCCGGCCG TAGCGGTGCC
ACGCAAGTGA TGTTCCCCAC CTGGGTGCTC AACAAAGCCT ATGACTCGGG CTTCACCATG
GGCCTGATGC GCAAGGACGT GGGCCTGGCC AGCGACCTGG CGGACAGCCT CGACATGGAC
CTGCCGCTGT CGCGCGTGGT CGCGCAGTTG TGGCAAGCCA GCAGCGAGAC CCTGGCGGAC
AACGAAGACT TCTGCGCCAT CGTGCAACGC ACCGATGCCA CCCTTTACGG TCATGGAGAA
TAA
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| Protein sequence | MAATLASKGF DVSGFDLSSA ALSQAESKGV KPVAERKQLI QSVDILILSL PKAEHVESVC
LGAGGISEWG HEGLIVVDTT TSTPEMSRKV AAELAKTGIA FIDAPVSGGP KGAATGTMSM
VIGAEDADLA RAMPVLEGMS GTRVHVGQCG AGNVAKIANN MLAACHLIST AEAVAMAARA
GVDPEKLLQG LNAGSGRSGA TQVMFPTWVL NKAYDSGFTM GLMRKDVGLA SDLADSLDMD
LPLSRVVAQL WQASSETLAD NEDFCAIVQR TDATLYGHGE
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