| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1819 |
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| Symbol | |
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| ID | 1183460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1986679 |
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| End bp | 1987878 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393194 |
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| Product | transporter, putative |
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| Protein accession | NP_791643 |
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| Protein GI | 28869024 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.967109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGA CACAGCACAC CACGCCGCAA CCGCCGATGA CTGTCACCCT GACCGTCGTT
TCCATCGTCA TGTTCACGTT CATCGGCTAC CTGAATATCG GTATTCCGCT CGCCGTCCTG
CCCGGTTATG TCCACAGCGA CCTGGGCTTC GGCGCGGTGA TCGCAGGCCT GGTGATAAGC
GTGCAGTATC TGGCGACGCT GATCAGCCGG CCGTGGGCGA GCCGCATCAT CGACAATCTG
GGCAGCAAGA AAGCCGTACA GATCGGCCTG ACCGGCTGCG GGCTGAGCGG TGTGTTCATG
CTGGTGCCGG TCTGGCTGGA CGCCTGGCCA ATGGCGAGCC TGGTAATTCT GCTGATTGGC
CGGGTGATCC TCGGCAGCGC GGAAAGCCTG GTAGGCTCCG GCTCGATTGG CTGGGGTATC
GGCCGGGTCG GCGCGCAGAA CACTGCCAAG GTGATTTCCT GGAACGGCAT CGCCAGCTAT
GGCGCACTGG CCATCGGCGC ACCACTGGGC GTGGGGATGG TCGACTCACT CGGATTGTGG
ACAGTGGGCG TGAGCATCAT GCTGCTGTGC GCGCTGGGCC TGTACCTGAC CTGGCACAAG
GAAGCCGCGC CGATTGTGCA CGGTGAACGA CTGCCGTTCA TGCATGTGCT GGGGCGGGTG
TTTCCGCACG GCATGGGCCT GGCGCTGGGC GGTATTGGTT TCGGCACCAT CGCAACCTTC
ATTACCCTGT ATTACGCGAG CAATCACTGG CCGAACGCAG CGCTGTGCCT GACCCTGTTT
GGTGGCAGTT TTATCGCTGC ACGCCTGTTG TTCGGCAACC TGATCAACCG CCTGGGCGGC
TTTCGGGTGG CGATTGTCTG CCTGTCGGTA GAGACGCTGG GGCTACTATT GCTGTGGATG
GCGCCGACGC CCGGCCTGGC GCTGGCCGGT GCAGCCTTGA CTGGCTTCGG CTTCTCGCTG
GTGTTCCCGG CGCTGGGTGT CGAAGCGGTG AATCTGGTCC CGGCCTCCAG TCGCGGGGCG
GCGGTGGGCG CTTATTCACT GTTCATCGAC CTGTCATTGG GCATCACCGG CCCACTGGCA
GGCGCGATTG CCGCCGGCTT TGGCTTTGTC TCGATCTTTC TGTTCGCGGC GCTGGCGTCA
CTTACCGGGC TGGGGCTGAG CGTTTATCTG TACAAGCAGG CACAGGCGTT GCGCCAGTGA
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| Protein sequence | MPQTQHTTPQ PPMTVTLTVV SIVMFTFIGY LNIGIPLAVL PGYVHSDLGF GAVIAGLVIS
VQYLATLISR PWASRIIDNL GSKKAVQIGL TGCGLSGVFM LVPVWLDAWP MASLVILLIG
RVILGSAESL VGSGSIGWGI GRVGAQNTAK VISWNGIASY GALAIGAPLG VGMVDSLGLW
TVGVSIMLLC ALGLYLTWHK EAAPIVHGER LPFMHVLGRV FPHGMGLALG GIGFGTIATF
ITLYYASNHW PNAALCLTLF GGSFIAARLL FGNLINRLGG FRVAIVCLSV ETLGLLLLWM
APTPGLALAG AALTGFGFSL VFPALGVEAV NLVPASSRGA AVGAYSLFID LSLGITGPLA
GAIAAGFGFV SIFLFAALAS LTGLGLSVYL YKQAQALRQ
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