| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1800 |
|---|
| Symbol | |
|---|
| ID | 1183441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1971940 |
|---|
| End bp | 1972251 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637393176 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791625 |
|---|
| Protein GI | 28869006 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4323] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.204714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACCA TCAAGCGTTT CTCAAGCTTT GCCGAGTTCT ATCCTTTCTA CCTCGCCGAG
CACAGCAGCA GTACCAGTCG GCGTCTGCAT TTTGTGGGCA CTTCGCTGGT TATCTTTTTG
CTCGCGTTTG GCGTGGGCAG CGGTCGCTGG GGGTTGTTGT GGTTGTTGCC GGTCGCGGGG
TACGGTTTTG CCTGGGCGGG GCATTTTTTC TTCGAGAAAA ACCGGCCGGC CACTTTCAAG
CATCCGTTTT ACAGTCTGCT CGGTGACTTC GTCATGTACC GCGACATGTT GCTGGGTAAG
GTCCCTTTCT GA
|
|---|
| Protein sequence | METIKRFSSF AEFYPFYLAE HSSSTSRRLH FVGTSLVIFL LAFGVGSGRW GLLWLLPVAG
YGFAWAGHFF FEKNRPATFK HPFYSLLGDF VMYRDMLLGK VPF
|
|---|
| |