10 homologs were found in PanDaTox collection
for query gene PSPTO_1785 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1785  hypothetical protein  100 
 
 
256 aa  525  1e-148  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3609  hypothetical protein  95.24 
 
 
252 aa  476  1e-133  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.0064832  normal  0.347756 
 
 
-
 
NC_009512  Pput_3837  hypothetical protein  70.7 
 
 
280 aa  347  9e-95  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_002947  PP_1878  hypothetical protein  71.09 
 
 
255 aa  347  1e-94  Pseudomonas putida KT2440  Bacteria  normal  normal  0.192229 
 
 
-
 
NC_010322  PputGB1_1453  hypothetical protein  70.7 
 
 
255 aa  346  3e-94  Pseudomonas putida GB-1  Bacteria  normal  normal  0.150556 
 
 
-
 
NC_010501  PputW619_1487  hypothetical protein  69.14 
 
 
255 aa  341  7e-93  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4191  hypothetical protein  71.43 
 
 
252 aa  324  7e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_27590  hypothetical protein  58.75 
 
 
257 aa  307  9e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00959157 
 
 
-
 
NC_009656  PSPA7_2335  hypothetical protein  58.75 
 
 
257 aa  305  3e-82  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0156027  n/a   
 
 
-
 
NC_009439  Pmen_1915  hypothetical protein  59.38 
 
 
255 aa  290  2e-77  Pseudomonas mendocina ymp  Bacteria  normal  0.0846835  normal  0.46148 
 
 
-
 
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