10 homologs were found in PanDaTox collection
for query gene PSPTO_1752 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_1752  hypothetical protein  100 
 
 		 80 aa  150  5e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0289049  n/a   
 
 
-
 
NC_007005  Psyr_3640  hypothetical protein  83.75 
 
 		 80 aa  85.5  2e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.278829  normal  0.641947 
 
 
-
 
NC_010501  PputW619_1381  hypothetical protein  51.35 
 
 		 87 aa  61.6  0.000000004  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1366  hypothetical protein  45.68 
 
 		 87 aa  60.1  0.000000009  Pseudomonas putida GB-1  Bacteria  normal  0.267059  normal  0.0156432 
 
 
-
 
NC_002947  PP_1774  hypothetical protein  46.58 
 
 		 104 aa  59.7  0.00000001  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0186705 
 
 
-
 
NC_009512  Pput_3940  hypothetical protein  44.44 
 
 		 87 aa  58.2  0.00000004  Pseudomonas putida F1  Bacteria  normal  1  normal  0.220746 
 
 
-
 
NC_007492  Pfl01_4059  hypothetical protein  50 
 
 		 82 aa  57  0.00000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.335767 
 
 
-
 
NC_008340  Mlg_0933  hypothetical protein  34.29 
 
 		 97 aa  42.4  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_1423  hypothetical protein  32.95 
 
 		 117 aa  41.2  0.005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.000000706417  n/a   
 
 
-
 
NC_012560  Avin_15890  hypothetical protein  56.52 
 
 		 99 aa  40.8  0.006  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
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