Gene PSPTO_1664 details

Gene Information

• Locus tag: PSPTO_1664
• ID: 1183301
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 1832622
• End bp: 1833269
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637393036
• Product: hypothetical protein
• Protein accession: NP_791489
• Protein GI: 28868870
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0800901
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACC TGACGTTACG TAGAACGATT CTGGACGAGC TTGAGTTTTT GCCCCACATC 
GACGCTGCCG CAATTGGCGT CACGATAGAA AACGGCGTGG TGGTGCTCAG CGGGCATGTG 
AAAACCTTCG CCGAAAAAAT CGCCGCCGAA CGCGCAGTCA AGAGCGTCAA AGGCGTCAAA 
GCCGTGGCCG TGGAACTTGA AGTACGGGTG CCGAGCAGCC TCTACATCGA CGACAGCGTG 
ATCGCCTCGC GCTGCCTGGA CCTGATTGGC TGGAACACGA TATCGCCCGA CCAGGCCATA 
CAGGTCAAGG TGCAGCACGG ACGGGTAACG CTTGAAGGCG ATGTGCAATG GCAATACCAG 
AAAGAAGCCG CACAAAAAGC CATCAACACC CTCGCAGGCG TTGCGGGCCT AGACAACCGG 
CTGATCGTCA GGCCTGAAAC TGCGTGCCTG GACATCAAGA CACTGATCGA ACAAGCCCTG 
GCCCGAAGCT CGGAACTGGA CGCCAGCAAA ATTCGCGTCA CCGCCGAGGG CAATCAAGTA 
AGGCTTGAAG GCTACGTTCA CCGCTGGCGT GAACGCCAAG CGGTCGAACA TGCGGCCTGG 
GCAGTGCCAG GTGTAAAGAA CGTGGACAAC CATCTGCTCA TCAACTGA 

 

Protein sequence

MSDLTLRRTI LDELEFLPHI DAAAIGVTIE NGVVVLSGHV KTFAEKIAAE RAVKSVKGVK 
AVAVELEVRV PSSLYIDDSV IASRCLDLIG WNTISPDQAI QVKVQHGRVT LEGDVQWQYQ 
KEAAQKAINT LAGVAGLDNR LIVRPETACL DIKTLIEQAL ARSSELDASK IRVTAEGNQV 
RLEGYVHRWR ERQAVEHAAW AVPGVKNVDN HLLIN