| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1631 |
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| Symbol | |
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| ID | 1183268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1785376 |
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| End bp | 1786572 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393003 |
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| Product | hypothetical protein |
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| Protein accession | NP_791456 |
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| Protein GI | 28868837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | [TIGR03106] hydrolase, peptidase M42 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCTG CAACCATTCC CGATCCGGAT CTGAAATACC TGCAGAAAGT TCTGTTGGAA
ATGCTCGCGA TCCCAAGCCC CACGGGCTTC ACCGACACCA TCGTGCGCTA CGTGGCCGAG
CGTCTGGAAG AACTGGGTAT CCCGTTTGAA TTGACCCGTC GCGGCACGAT TCGCGCAACC
CTCAAGGGTA AACAGAACAG CCCCGACCGC GCAGTATCCG CGCACCTGGA CACCATTGGT
GCCAGCGTTC GGGAGGTCAA AGACAATGGC CGTCTGGCGC TTGCCGCCGT CGGCTGCTGG
TCCAGCCGGT TTGCCGAAGG CAGCCGGGTC AGCGTGTTCA CGGACACCGG CGTGATCCGT
GGCAGCGTGC TGCCGTTGAT GGCGTCCGGG CATGCCTTCA ATACCGCTGT GGATGAAATG
CCGATCAGCT GGGACCACAT CGAGCTGCGC CTGGATGCCT ACTGCACCAC CCGCGCTGAT
TGTGAATCAC TGGGCATCGG CATTGGCGAC TTCGTGGCAT TCGACCCGCT GCCAGAGTTC
ACCGAGAGCG GCCACATCAG TGCCCGCCAT CTGGACGACA AGGCCGGTGT TGCCGCGCTG
CTGGCGGCGC TCAAGTCGAT CGTCGAAAGC GGTGCCGAGC CGCTGATCGA CTGCCATCCG
CTGTTCACCA TCACCGAAGA AACCGGCACC GGTGCAGCGG GCGTGCTGCC CTGGGACGTG
AGCGAGTTCG TCGGTATCGA CATCGCACCG GTCGCACCCG GCCAGCACTC CAGCGAGCAC
GCGGTGAGCG TGGCGATGCA GGACTCGGGC GGTCCTTATG ATTACCACCT GTCTCGTCAT
TTGCTGCGTC TGGGCGTGGA AAACGAGCTG CCGGTCCGCC GCGACCTGTT CCGCTACTAC
TACAGCGATG CGCATTCTGC GGTGACGTCG GGGCACGATA TTCGTACCGC CCTGCTGGCT
TTTGGCTGCG ACGCCACCCA CGGCTACGAG CGCACCCATA TCGACAGCCT GGCCGCGCTC
AGCAAGCTGC TTGGCGCGTA CATCCTCAGC CCGCCAGTGT TCGCCAGCGA TGCCAAACCG
GCGCAGAGTT CGCTGGAGCG GTTCAGTCAT CAGATTGAAC ATGACGCGCA GATGGAGTCC
GACACCCGCG TGCCGCCGGT AGACAGCCTG ATCGGGCTGA ATCGCGAGGA GAGTTGA
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| Protein sequence | MTPATIPDPD LKYLQKVLLE MLAIPSPTGF TDTIVRYVAE RLEELGIPFE LTRRGTIRAT
LKGKQNSPDR AVSAHLDTIG ASVREVKDNG RLALAAVGCW SSRFAEGSRV SVFTDTGVIR
GSVLPLMASG HAFNTAVDEM PISWDHIELR LDAYCTTRAD CESLGIGIGD FVAFDPLPEF
TESGHISARH LDDKAGVAAL LAALKSIVES GAEPLIDCHP LFTITEETGT GAAGVLPWDV
SEFVGIDIAP VAPGQHSSEH AVSVAMQDSG GPYDYHLSRH LLRLGVENEL PVRRDLFRYY
YSDAHSAVTS GHDIRTALLA FGCDATHGYE RTHIDSLAAL SKLLGAYILS PPVFASDAKP
AQSSLERFSH QIEHDAQMES DTRVPPVDSL IGLNREES
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