| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1558 |
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| Symbol | adhC |
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| ID | 1183195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1720850 |
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| End bp | 1721962 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392930 |
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| Product | alcohol dehydrogenase, class III |
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| Protein accession | NP_791383 |
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| Protein GI | 28868764 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.86343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAAGT CACGCGCCGC TGTCGCCTTT GAAGCCAAAA AGCCACTGGA GATCGTTGAA
GTCGATGTCG CCATGCCCAA AGCGGGAGAA GTGCTGCTCA AAGTAGTGGC ATCCGGCGTC
TGCCATACCG ATGCGTACAC GCTTTCCGGC GCCGACCCTG AGGGGATCTT TCCGTCGATT
CTCGGCCATG AAGGCGGCGC GATTGTCGAA GCCATCGGCG AGGGCGTGAC CTCTGTGGCG
GTCGGTGATC ACGTCATTCC GCTGTACACC CCGGAATGCC GTCAGTGCAA ATTCTGCCGG
TCGGGGAAAA CCAACCTGTG TCAGGCGATC CGTTCGACCC AAGGCAAAGG CCTGATGCCG
GATGGCACCA CGCGCTTCTC TTATAAGGGC GAGCCGATTT TCCACTACAT GGGCACCTCG
ACCTTCTCCG AATACACCGT GCTGCCAGAA ATCTCGGTGG CCAAAATCGA CAAGAAAGCC
CCCCTGGAAA AAGTCTGCCT GCTGGGTTGC GGCGTCACCA CCGGTATTGG CGCAGTGCTC
AACACCGCCA AGGTCAAGCC GGGCGATACC GTAGCGGTCT TCGGTCTGGG CGGTATCGGC
CTCTCGGCGG TGATTGGCGC GGTCAAAGCC AAGGCGGCGC GAATCATCGC CATCGACATC
AACCCGGCCA AGTTCGAGAT TGCCAAACAG CTCGGCGCGA CCGATTGCGT CAATCCGAAG
GATTTCGACC GTCCGATCCA GGAAGTCATC GTTGACATGA CCGATGGCGG CGTCGACTTT
TCGTTCGAGT GCATCGGCAA TGTGCAGCTC ATGCGTTCAG CGCTGGAATC CTGCCACAAG
GGCTGGGGTG AGTCGGTGAT CATTGGCGTG GCCGGTGCCG GTCAGGAAAT CTCGACCCGT
CCATTCCAGT TGGTGACCGG GCGCGTCTGG CGCGGTTCGG CGTTCGGGGG CGTGCGTGGC
CGTACCGAAT TGCCAAGCTA CGTCGACATG GCGCAGACCG GCGAAATTCC GCTGGACACG
TTCATCACCC ACACAATGGG CCTGGAAGAC ATCAACAAGG CATTCGATCT GATGCATGAA
GGCAAAAGCA TCCGCACCGT CATTCATTTT TGA
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| Protein sequence | MIKSRAAVAF EAKKPLEIVE VDVAMPKAGE VLLKVVASGV CHTDAYTLSG ADPEGIFPSI
LGHEGGAIVE AIGEGVTSVA VGDHVIPLYT PECRQCKFCR SGKTNLCQAI RSTQGKGLMP
DGTTRFSYKG EPIFHYMGTS TFSEYTVLPE ISVAKIDKKA PLEKVCLLGC GVTTGIGAVL
NTAKVKPGDT VAVFGLGGIG LSAVIGAVKA KAARIIAIDI NPAKFEIAKQ LGATDCVNPK
DFDRPIQEVI VDMTDGGVDF SFECIGNVQL MRSALESCHK GWGESVIIGV AGAGQEISTR
PFQLVTGRVW RGSAFGGVRG RTELPSYVDM AQTGEIPLDT FITHTMGLED INKAFDLMHE
GKSIRTVIHF
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