| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1553 |
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| Symbol | kdsA |
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| ID | 1183190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1716380 |
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| End bp | 1717225 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637392925 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | NP_791378 |
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| Protein GI | 28868759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.482953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCAGA AAATCATCCG CACAGGTTCG ATCGAGATCG CCAACGACAA GCCGATGGTG
GTGTTCGGCG GCATGAACGT ACTCGAATCC CGGGATATGG CCATGCAGGT CTGTGAAGAG
TACGTAAGGG TGACCGAAAA GCTCGGTATC CCTTACGTGT TCAAGGCCAG CTTCGACAAG
GCCAACCGCT CTTCGGTTAA TTCCTACCGC GGGCCGGGCC TTGAAGAAGG CATGCGTATT
TTCGAAGAGA TCAAGCGCAC CTTCAACGTG CCGCTGATCA CCGATGTGCA CGAGCCTCAT
CAGGCCGCCG TGGTGGCCGA AGTGTGCGAC ATCATCCAGC TGCCGGCGTT TCTGTCGCGT
CAGACCGACC TGGTCGTTGC GATGGCCAAG ACCGGCGCAA TCATCAATAT CAAGAAAGCC
CAGTTTCTCG CACCGCAGGA AATGAAACAC ATCCTGACCA AGTGTGAAGA GGCGGGTAAC
GATCAGTTGA TTCTCTGCGA GCGTGGTTCC AGCTTTGGTT ACAACAACCT GGTGGTGGAC
ATGCTCGGCT TCGGCATCAT GAAGCAGTTC GAGTACCCGG TGCTGTTCGA CGTGACCCAC
GCGCTGCAGA TGCCGGGTGG TCGCTCCGAT TCTGCCGGTG GTCGTCGCGC CCAGGTGCTG
GATCTGGCCA AGGCCGGCAT CAGCCAGAAC CTGGCCGGTT TGTTCCTTGA AGCGCATCCC
GATCCTGACA ACGCCAAGTG CGATGGCCCA TGTGCCTTGC GTCTGGACAA GCTGGAGCCG
TTCCTGGCCC AACTCAAGTC ACTGGATGAA CTTGTGAAAA GTTTTCCGAT CGTAGAGACC
GCTTGA
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| Protein sequence | MAQKIIRTGS IEIANDKPMV VFGGMNVLES RDMAMQVCEE YVRVTEKLGI PYVFKASFDK
ANRSSVNSYR GPGLEEGMRI FEEIKRTFNV PLITDVHEPH QAAVVAEVCD IIQLPAFLSR
QTDLVVAMAK TGAIINIKKA QFLAPQEMKH ILTKCEEAGN DQLILCERGS SFGYNNLVVD
MLGFGIMKQF EYPVLFDVTH ALQMPGGRSD SAGGRRAQVL DLAKAGISQN LAGLFLEAHP
DPDNAKCDGP CALRLDKLEP FLAQLKSLDE LVKSFPIVET A
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