Gene PSPTO_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1388 
SymbolhrpG 
ID1183024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1528457 
End bp1528888 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID637392760 
Producttype III secretion protein HrpG 
Protein accessionNP_791215 
Protein GI28868596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCA GTGAATTCAC CGAGATCGTT GGCCAGTGGT CTGCCCAGCG TCCAGCGATG 
CCGCTGGACT GCTGGATCGA TGACGCCAAT GCTCGGCTGG CGGTCGTCGG CGACGGGGTG
CGTTGCAGTA TCGAACTGCT CGACCCGTAC GACGCCGGTG ACCCGCAACG GCTCGAAGCC
TTGCTTGGCG AGGGCGGCGC AAGCCTGGCG TGTGCCTGCG ACGGCGCGCT GGCCATCGAT
CCGCAGACCC GCTGCGTAGT GCTGGTCAGC TGGATGGCAA ACCCCTGCAG CCTCGGTGAC
CTGCTCGATC GTCTGGAAAG CCTGGCCAAT CAGCGCGCGG CCATGCTCAG CCTGATGCAA
ACCACTATTC GTAACACGAC GCCCACTTTG TCCGGGCGTT CGATCCTCAA TCACCGGCAA
CCGGGAGTGT GA
 
Protein sequence
MEFSEFTEIV GQWSAQRPAM PLDCWIDDAN ARLAVVGDGV RCSIELLDPY DAGDPQRLEA 
LLGEGGASLA CACDGALAID PQTRCVVLVS WMANPCSLGD LLDRLESLAN QRAAMLSLMQ
TTIRNTTPTL SGRSILNHRQ PGV