Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1361 |
Symbol | |
ID | 1182997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1498345 |
End bp | 1500150 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637392733 |
Product | amidase family protein |
Protein accession | NP_791188 |
Protein GI | 28868569 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.73258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCAC TCGACATTAA TGAACTTCAG TCGGCGTTAC GCTCGGGTAC AACCACCCTG GCGACGCTTG TGCACTCCCT GACGATGCAC ATTGATGCAG ATGATCGACC CGAAGTCTGG ATTTATCGGG TGCCCGCTAC GGACCTGCTT GAAAGAGCAG CCGCACTGGA AGGTATCGCC GCAGCGCTGG GCGATTCGGT GTATGAGCAA CTGCCGCTGT TCGGTGTGCC GTTTGCGGTC AAGGACAATT TCGACGTAGC GGGAATGCTC ACCACGGCTG CATGCCCGGC CTTCGCTTAT ACCGCCAGAG AAAACGCTCA TGTGGTGCAA CGGCTGCTCG ACAGTGGCGC GTTGTTGATC GGCAAAACCA ATCTCGATCA GTTCGCCACC GGCCTGGTGG GCGTCCGCTC GCCTTACGGC GCGGTGCGCA ACGCTCACGA TCCGGCCTAT GTGAGCGGCG GTTCCAGTTC AGGGTCCGCT GTGGCGGTAG CGCGCGGCTA CGTGAGTTTT GCACTGGGCA CCGACACGGC AGGCTCGGGT CGAGTGCCCG CAGGCTTCAA TGGCATCGTC GGGCTCAAGC CCAGCCTTGG CCTGTTCAGC AGTCGCGGCG TTGTGCCCGC TTGCCGCACG CTGGACTGCC CGTCGATCTT TGCCACCGAC GTGATGCAAG CCTGGCAGGT GGCGCAGGTC ATCGCCGCCT ACGATCCGCT GGATTCGGGC AGTGTGGCCG TGCAGGCCTT GCCGGTGCAG CGCCGGGCCA GGCGCGTGGC GGTTGCACGC CAGTGCGAGT TCTTCGGAGA CACTCAGGCG CAGGCGGCGT ATTCAAAGGC GCTGGCGGCC CTGCATGACG ATCCACTGGT GACCCTCAAA GAGATCGAAT TTGACGTGTT CGCCGAAGCG GCGGCGCTTC TCTATCAAGG CCCGTGGGTG GCCGAACGGC GGGCAGCCGT CGGCAGTTTT TTTACTGAAA ACGCTGCCGA TGTTCACCCG GTGGTGCGCG GCATCCTGCA GAGCGCTGCG TCCTTCGATG CCGTCGATGC GTTCAACGCC CGTTATCGCC TGGCCGACCT GACCCGGGCA GCCGAACACC TATTGGCTGA TGTGGATGTG CTGGTGGTGC CGACTGCGCC GTGCATGCCG ACCATCGATG CGGTGCTGGA AAACCCCATC GAGCTCAATT CACGGCTCGG CTACTACACC AACTTCGTCA ACCTGATGAA TATGTGCGCC ATCGCCATCC CGGCAATCGC TCGTGCTGAC GGTTTGCCGG CGGGCATCAC GCTGATAGGA CCGGCGGGTG CCGATCAGCG GCTCGCAGAG TTCGCCGCTG CCTGGCAACC GCTGCTCGGC AAGGCCGACC AGCGCGAGGC CGTCGCGATG GCGCCCCTGC CCTTTAATGC CCCGACCGTG CAAGTGGCGG TGGTGGGCGC GCACTTGTAC GGCCAGCCGC TCAACTGGCA GTTGCTGGAA AGCAGCGCGC GCCTGCTGCA GCGCACCACC ACCAGCGCAG ATTATCGACT CTATGCGCTG GCCAATACGT CTCCGCCAAA ACCGGGTCTG GTGCGTGTGA CGGCACAAGG CGCAAGCATC GAGGTCGAGG TCTGGGAGAT GCCGTTGAGC CTGTTCGGCG GCTTTGTCGC CGAGATTCCT GCACCGCTGG GCATCGGCTC GCTGCAATTG GCCGACGGTC AGTGGGTCAA GGGCTTCATC TGTGAACCCG CAGGCCTTGA AGGCGCGCTG GACATCACTG ATTTCAAAGG CTGGCGCGCC TACCGCGCCG CGCAAACATC TTCCATCGCT CATTGA
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Protein sequence | MIALDINELQ SALRSGTTTL ATLVHSLTMH IDADDRPEVW IYRVPATDLL ERAAALEGIA AALGDSVYEQ LPLFGVPFAV KDNFDVAGML TTAACPAFAY TARENAHVVQ RLLDSGALLI GKTNLDQFAT GLVGVRSPYG AVRNAHDPAY VSGGSSSGSA VAVARGYVSF ALGTDTAGSG RVPAGFNGIV GLKPSLGLFS SRGVVPACRT LDCPSIFATD VMQAWQVAQV IAAYDPLDSG SVAVQALPVQ RRARRVAVAR QCEFFGDTQA QAAYSKALAA LHDDPLVTLK EIEFDVFAEA AALLYQGPWV AERRAAVGSF FTENAADVHP VVRGILQSAA SFDAVDAFNA RYRLADLTRA AEHLLADVDV LVVPTAPCMP TIDAVLENPI ELNSRLGYYT NFVNLMNMCA IAIPAIARAD GLPAGITLIG PAGADQRLAE FAAAWQPLLG KADQREAVAM APLPFNAPTV QVAVVGAHLY GQPLNWQLLE SSARLLQRTT TSADYRLYAL ANTSPPKPGL VRVTAQGASI EVEVWEMPLS LFGGFVAEIP APLGIGSLQL ADGQWVKGFI CEPAGLEGAL DITDFKGWRA YRAAQTSSIA H
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