Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1332 |
Symbol | ilvE |
ID | 1182968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1462008 |
End bp | 1463027 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392704 |
Product | branched-chain amino acid aminotransferase |
Protein accession | NP_791159 |
Protein GI | 28868540 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAG AAAGCATCAA CTGGGACACT CTGGGTTTTG ACTATATCAA GACTGACAAA CGCTATCTGT CTCATTGGCG CGACGGTGCC TGGGATCAGG GCTCGCTGAC TGAAGACAAC ACGCTGCACA TCAGCGAAGG TTCGACCGCG CTGCATTACG GTCAACAGTG CTTTGAAGGC CTGAAGGCCT ATCGCTGCAA GGACGGCTCG ATCAACCTGT TCCGTCCCGA CCAGAACGCA CAGCGTATGC AGCGCAGCTG TTCCCGTCTG CTGATGCCCC ATGTACCCAC CGACGTGTTC ATCGAGGCCT GCAAGCAGGT CGTCAAGGCC AACGAGCGTT TCATCCCGCC GTATGGCTCC GGCGGCGCGC TGTACCTGCG CCCGTTCGTG ATCGGAGTGG GTGACAACAT CGGCGTGCGG ACTGCGCCAG AGTTTATCTT CTCGATCTTC TGCATTCCGG TTGGTGCTTA TTTCAAGGGC GGCCTGAAGC CGAACAACTT CGTGATCTCC GGTTACGACC GTGCTGCGCC CAACGGCACC GGTGCTGCCA AGGTCGGTGG CAACTATGCC GCCAGCCTGA TGCCGGGTTC GGAAGCCAAG AAACACAGCT TCGCGGACTG TATCTACCTC GACCCGCAGA CTCATTCCAA AATCGAGGAA GTGGGTTCGG CCAACTTCTT CGCCATCACC AGCGACGATG TGTTCCTGAC GCCTAAATCG CCATCAGTGT TGCCAGGCAT TACCCGCCTG TCGCTGATCG AACTGGCAAA AAACCGTTTG GGCCTGACGG TCGAGGAGGG CGATGTGTTC ATCGACCAGC TCGACACATT CAAGGAAGCC GGCGCGTGCG GCACCGCTGC AGTGATCACC CCGATCGGCG GCATTTCCTA CCAGGACAAC CTGCACGTGT TCTACAGCCA GACCGACGTC GGCCCGGTTA CCCAGCGTCT GTACAAGGAA CTGACCGGTG TGCAATCCGG TGACATCGAG CCGCCCGCCG GCTGGATCGT CAAGGTCTGA
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Protein sequence | MSQESINWDT LGFDYIKTDK RYLSHWRDGA WDQGSLTEDN TLHISEGSTA LHYGQQCFEG LKAYRCKDGS INLFRPDQNA QRMQRSCSRL LMPHVPTDVF IEACKQVVKA NERFIPPYGS GGALYLRPFV IGVGDNIGVR TAPEFIFSIF CIPVGAYFKG GLKPNNFVIS GYDRAAPNGT GAAKVGGNYA ASLMPGSEAK KHSFADCIYL DPQTHSKIEE VGSANFFAIT SDDVFLTPKS PSVLPGITRL SLIELAKNRL GLTVEEGDVF IDQLDTFKEA GACGTAAVIT PIGGISYQDN LHVFYSQTDV GPVTQRLYKE LTGVQSGDIE PPAGWIVKV
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