Gene PSPTO_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1332 
SymbolilvE 
ID1182968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1462008 
End bp1463027 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content59% 
IMG OID637392704 
Productbranched-chain amino acid aminotransferase 
Protein accessionNP_791159 
Protein GI28868540 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG AAAGCATCAA CTGGGACACT CTGGGTTTTG ACTATATCAA GACTGACAAA 
CGCTATCTGT CTCATTGGCG CGACGGTGCC TGGGATCAGG GCTCGCTGAC TGAAGACAAC 
ACGCTGCACA TCAGCGAAGG TTCGACCGCG CTGCATTACG GTCAACAGTG CTTTGAAGGC 
CTGAAGGCCT ATCGCTGCAA GGACGGCTCG ATCAACCTGT TCCGTCCCGA CCAGAACGCA 
CAGCGTATGC AGCGCAGCTG TTCCCGTCTG CTGATGCCCC ATGTACCCAC CGACGTGTTC 
ATCGAGGCCT GCAAGCAGGT CGTCAAGGCC AACGAGCGTT TCATCCCGCC GTATGGCTCC 
GGCGGCGCGC TGTACCTGCG CCCGTTCGTG ATCGGAGTGG GTGACAACAT CGGCGTGCGG 
ACTGCGCCAG AGTTTATCTT CTCGATCTTC TGCATTCCGG TTGGTGCTTA TTTCAAGGGC 
GGCCTGAAGC CGAACAACTT CGTGATCTCC GGTTACGACC GTGCTGCGCC CAACGGCACC 
GGTGCTGCCA AGGTCGGTGG CAACTATGCC GCCAGCCTGA TGCCGGGTTC GGAAGCCAAG 
AAACACAGCT TCGCGGACTG TATCTACCTC GACCCGCAGA CTCATTCCAA AATCGAGGAA 
GTGGGTTCGG CCAACTTCTT CGCCATCACC AGCGACGATG TGTTCCTGAC GCCTAAATCG 
CCATCAGTGT TGCCAGGCAT TACCCGCCTG TCGCTGATCG AACTGGCAAA AAACCGTTTG 
GGCCTGACGG TCGAGGAGGG CGATGTGTTC ATCGACCAGC TCGACACATT CAAGGAAGCC 
GGCGCGTGCG GCACCGCTGC AGTGATCACC CCGATCGGCG GCATTTCCTA CCAGGACAAC 
CTGCACGTGT TCTACAGCCA GACCGACGTC GGCCCGGTTA CCCAGCGTCT GTACAAGGAA 
CTGACCGGTG TGCAATCCGG TGACATCGAG CCGCCCGCCG GCTGGATCGT CAAGGTCTGA
 
Protein sequence
MSQESINWDT LGFDYIKTDK RYLSHWRDGA WDQGSLTEDN TLHISEGSTA LHYGQQCFEG 
LKAYRCKDGS INLFRPDQNA QRMQRSCSRL LMPHVPTDVF IEACKQVVKA NERFIPPYGS 
GGALYLRPFV IGVGDNIGVR TAPEFIFSIF CIPVGAYFKG GLKPNNFVIS GYDRAAPNGT 
GAAKVGGNYA ASLMPGSEAK KHSFADCIYL DPQTHSKIEE VGSANFFAIT SDDVFLTPKS 
PSVLPGITRL SLIELAKNRL GLTVEEGDVF IDQLDTFKEA GACGTAAVIT PIGGISYQDN 
LHVFYSQTDV GPVTQRLYKE LTGVQSGDIE PPAGWIVKV