| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1295 |
|---|
| Symbol | gltK |
|---|
| ID | 1182931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1424835 |
|---|
| End bp | 1425995 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637392669 |
|---|
| Product | glucose ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_791124 |
|---|
| Protein GI | 28868505 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTC TCGAATTACG CAACGTCAAC AAGACCTACG GCAGCAACTT GCCGGACACG
CTCAAGAACA TCGAACTGTC GATCAAGGAT GGTGAGTTTC TGATCCTGGT CGGCCCGTCC
GGTTGCGGCA AATCCACCCT GATGAACTGC ATCGCCGGGC TGGAAAGCAT CAGCGGCGGG
GCGATCCTCA TCGATGGAGA GGATGTCAGC GGTACCAGCC CGAAAGACCG TGACATCGCG
ATGGTGTTTC AGTCCTACGC GCTGTACCCG ACCATGACCG TGCGCGAAAA CATCTCGTTC
GGGCTCAAGA TCCGCAAGAT GCCGCAAGCC GCCATCGACG AAGAAGTCGC TCGCGTTGCC
AAGCTGCTGC AAATCGAACA CCTGCTCAAT CGCAAGCCCG GGCAGATGTC CGGTGGTCAG
CAGCAGCGTG TGGCGATGGG CCGTGCCCTG GCGCGTCGGC CGAAGATTTA CCTGTTCGAC
GAACCGCTGT CCAACCTCGA CGCCAAGCTG CGGGTCGAGA TGCGTACTGA AATGAAGCTG
ATGCATCAAC GCCTGAAAAC CACCACGGTC TACGTGACCC ACGATCAGAT CGAGGCGATG
ACGCTGGGCG ACAAAGTGGC GGTCATGAAA GACGGTATCG TTCAGCAGTT TGGTACGCCC
AAGCAGATTT ACAACGACCC GGCCAATCTG TTTGTGGCCA GCTTCATTGG CTCGCCGCCC
ATGAACTTCA TTCCGTTGCG CCTGCAACGC AAGGATGGCC AGCTGTTTGC GCTGCTCGAC
AGCGGTCAGG CGCGTTGCGA ACTGCCAGTG GGCGTTGCCG ATGCAGGGCT TGAAGATCGC
GAAATCATTC TGGGTATTCG CCCGGAACAG ATTATGCTGG CTGCCGGCGA CCAGGCGGGT
CTGCCTGCTA TTCGTGCCGA AGTGCAAGTC ACTGAGCCCA CCGGGCCGGA TACACTGGTG
TTTGTCACGC TGAACCAGAG CAAGGTGTGC TGTCGTCTTG CCCCGGATGT CGCACCGCAA
GTGGGCGAGA GCCTGACGCT GCAATTTGAC CCGTCCAAGG TGCTGATTTT CGACGCCAAG
AGCGGCGAGC GTCTGGGGGT TTTAGGGCAG TCACCATCAG CCGAGCGGGT AAACAACGTC
TCCCAGTTGA ACCGCAAGTG A
|
|---|
| Protein sequence | MATLELRNVN KTYGSNLPDT LKNIELSIKD GEFLILVGPS GCGKSTLMNC IAGLESISGG
AILIDGEDVS GTSPKDRDIA MVFQSYALYP TMTVRENISF GLKIRKMPQA AIDEEVARVA
KLLQIEHLLN RKPGQMSGGQ QQRVAMGRAL ARRPKIYLFD EPLSNLDAKL RVEMRTEMKL
MHQRLKTTTV YVTHDQIEAM TLGDKVAVMK DGIVQQFGTP KQIYNDPANL FVASFIGSPP
MNFIPLRLQR KDGQLFALLD SGQARCELPV GVADAGLEDR EIILGIRPEQ IMLAAGDQAG
LPAIRAEVQV TEPTGPDTLV FVTLNQSKVC CRLAPDVAPQ VGESLTLQFD PSKVLIFDAK
SGERLGVLGQ SPSAERVNNV SQLNRK
|
|---|
| |