Gene PSPTO_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1282 
Symbol 
ID1182918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1409689 
End bp1410147 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content58% 
IMG OID637392656 
Producthypothetical protein 
Protein accessionNP_791111 
Protein GI28868492 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC GCCCGGTGCT GTTAAGCTGG CCGGGCTTTC CGAACCTGCC TGTAGAGACC 
ATGACGTACA AACCACCCGG CTCAAGACTC TCACGCCTTC TATACGGCAT CCTTGCCTAT
GTCGCTCTTG GCATAGGCAT TATTGCGATC TTCATTCCCG GTTTGCCGAC CACCGAATTC
ATCCTGCTGG CGGCCTGGGC TGCGACGCGC AGTTCGCCAA GACTGAACGC CTGGCTGGAA
AACCACCGCG TGTTCGGCCC GATCCTGTAC AACTGGCGTA ACGGCCGGCT GGTTGCACGC
AAGGCCAAGA TCAGCGCCAC CATCAGCATG CTGGTGTGTG CCGTGGTGAT GCTCAGCCTG
ATCGGCCATG CATGGTGGCT TTACTTGGCG CTCACAGGCA TGGCGATGGG CAACCTGTGG
ATATGGTCAA GACCGGAGCC GGCCAAAAAA GCAGATTGA
 
Protein sequence
MKKRPVLLSW PGFPNLPVET MTYKPPGSRL SRLLYGILAY VALGIGIIAI FIPGLPTTEF 
ILLAAWAATR SSPRLNAWLE NHRVFGPILY NWRNGRLVAR KAKISATISM LVCAVVMLSL
IGHAWWLYLA LTGMAMGNLW IWSRPEPAKK AD