Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1282 |
Symbol | |
ID | 1182918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1409689 |
End bp | 1410147 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392656 |
Product | hypothetical protein |
Protein accession | NP_791111 |
Protein GI | 28868492 |
COG category | [S] Function unknown |
COG ID | [COG2832] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC GCCCGGTGCT GTTAAGCTGG CCGGGCTTTC CGAACCTGCC TGTAGAGACC ATGACGTACA AACCACCCGG CTCAAGACTC TCACGCCTTC TATACGGCAT CCTTGCCTAT GTCGCTCTTG GCATAGGCAT TATTGCGATC TTCATTCCCG GTTTGCCGAC CACCGAATTC ATCCTGCTGG CGGCCTGGGC TGCGACGCGC AGTTCGCCAA GACTGAACGC CTGGCTGGAA AACCACCGCG TGTTCGGCCC GATCCTGTAC AACTGGCGTA ACGGCCGGCT GGTTGCACGC AAGGCCAAGA TCAGCGCCAC CATCAGCATG CTGGTGTGTG CCGTGGTGAT GCTCAGCCTG ATCGGCCATG CATGGTGGCT TTACTTGGCG CTCACAGGCA TGGCGATGGG CAACCTGTGG ATATGGTCAA GACCGGAGCC GGCCAAAAAA GCAGATTGA
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Protein sequence | MKKRPVLLSW PGFPNLPVET MTYKPPGSRL SRLLYGILAY VALGIGIIAI FIPGLPTTEF ILLAAWAATR SSPRLNAWLE NHRVFGPILY NWRNGRLVAR KAKISATISM LVCAVVMLSL IGHAWWLYLA LTGMAMGNLW IWSRPEPAKK AD
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