| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1268 |
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| Symbol | valS |
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| ID | 1182904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1389375 |
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| End bp | 1392221 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392643 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | NP_791098 |
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| Protein GI | 28868479 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGA CTTACCAGCC TCACGCCATC GAAACTTCCT GGTACCAGAC CTGGGAGTCC
GAGAACTATT TCGCTCCGCA GGGCGCGGGT GACTCGTACA CCATCATGAT CCCGCCGCCG
AATGTCACGG GCAGCCTGCA CATGGGTCAC GGTTTCAACA ACGCGATCAT GGACGCGCTG
ATCCGTTTCC GGCGCATGCA GGGTCGCAAC ACGCTGTGGC AACCGGGCAC CGACCACGCC
GGTATCGCCA CGCAGATGCT GGTCGAGCGT CGCCTCGAAG CGCAAGGCGT AAGCCGTCAC
GAGCTGGGTC GCGAGAAGTT TCTCGACAAG ATCTGGGAAT GGAAAGCCGA GTCCGGCGGC
AATATCAGCC GTCAGATCCG CCGCCTGGGT TCGTCCGTCG ACTGGAGCCG TGAGCGCTTC
ACCATGGACG ACGGCTTGTC CGATGCCGTG AAAGAAGCCT TCGTGCGCCT GCATGAAGAC
GGTCTGATCT ACCGTGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACCGCGATC
TCCGACCTCG AAGTGGAAAA TCACGACGAA AAAGGCCATC TGTGGAACCT GCGCTACCCG
CTGGCGGACG GCGCAAAAAC CGCCGAGGGC CTGGATTACC TGATCGTTGC CACTACCCGC
CCGGAAACCA TGCTCGGTGA CGCTGCTGTT GCCGTGAACC CGCAGGACGA GCGCTACAAG
GCGCTGATTG GCAAGTTCGT CGAGCTGCCG CTGGTTGGCC GCCGCATCCC GATCATTGCC
GATGATTACT GCGACCCTGA ATTCGGCACC GGCTGCGTGA AAATCACCCC GGCCCACGAT
TTCAACGACT ATGAAGTCGG CAAGCGCCAC AACCTGCCGC TGCTGAACAT TTTCGACAAG
AATGCCAATG TGTTGCCTGC CGCCCAGGTG TTCAACCTCG ACGGCAAGCT GAACGAAAGC
GTTGACGGCA CCCTGCCCGC GGCCTACGCC GGGCTGGACC GTTTTGAAGC GCGCAAGCAG
ATCGTCGCTG CATTCGATGC CGCCGGCCTG CTGGTCAGCA TAGATGATCA CGCCCTGAAG
GTGCCGAAAG GCGACCGCTC CGGCACCATC ATCGAGCCAT GGCTGACCGA CCAATGGTAC
GTGTCCACCA AGCCGCTGGC CGAGCCTGCA ATCGCTGCGG TCGAAGACGG TCGCATCGCC
TTCGTGCCCA AGCAATACGA AAACATGTAC TTCTCGTGGA TGCGTGACAT CCAGGACTGG
TGCATCAGCC GCCAGCTCTG GTGGGGCCAC CGCATCCCGG CCTGGTACGA CGAGTCCGGC
AAAGTCTATG TAGGTCGTGA CGAAGCCGAA GTTCGCGCCA AGAACAACCT GGGCCCGGAA
ATCGCGCTGC AGCAGGACAA CGACGTACTC GACACCTGGT TCAGTTCGGG ACTGTGGACC
TTCTCCACGC TCGGATGGCC GGAAAAGACC AAGGCACTGG AGACTTTCCA CTCCACGGAC
GTGCTGGTCA CCGGCTTCGA CATCATTTTC TTCTGGGTCG CCCGGATGAT CATGCTCACC
CTGCATTTGG TGAAGAACGA AGACGGCACG CCGCAAGTCC CGTTCAAGAC GGTGTATGTG
CACGGCCTGG TGCGTGATGG CCAGGGCCAG AAGATGTCCA AGTCCAAGGG CAACGTTCTG
GACCCGCTGG ACATCGTTGA CGGTATCGAC CTCGAAACGC TGGTAGAGAA ACGCACCAGT
GGCCTGATGC AACCGCAACT GGCGAAGAAG ATCGAGAAGC AGACCCGTCA GGAATTCGCC
GATGGCATCG CCAGCTATGG CACCGACGCC CTGCGCTTCA CCTTCTGTTC GCTGGCGTCT
ACCGGTCGCG ACATCAAGTT CGACATGGGC CGCGTCGAGG GCTATCGCAA CTTCTGCAAC
AAGATCTGGA ACGCCGCACG TTACGTGCTG GACAAGGGCG AAGACTGCGG CCAGAACGGC
GAAGCCGTCG AACTGTCGCT GGCGGATCGC TGGATCATCT CGCAATTGCA ACGCACCGAA
GCCGAAGTGA CCCGCCAACT GGACCAGTTC CGTTTCGACC TCGCCGCGCA GGCGTTGTAC
GAGTTCATCT GGAACCAGTA TTGCGACTGG TATCTGGAGC TGTCCAAGCC TGTGCTGTGG
GACGAAACCG CATCGATCGA ACGTCAGCGC GGCACACGTC GCACGCTGGT TCGCGTGCTG
GAAGTCGCGC TGCGTCTGGC GCATCCATTC ATGCCGTTCA TCACAGAAGA AATCTGGCAG
CGCCTTGCGC CGCTGGCCGG TGTGGAAGGC AAGACCATCA TGCTGCAACC CTGGCCCGTG
GCCAACGAAG CACGCATCGA TCAGGCTGCC GAAGACGACA TCGAATGGCT CAAGGGCCTG
ATGCTTGCCG TGCGTAACAT CCGTGGCGAA ATGAACATCG GTCCGGGCAA GCCGCTGCAA
CTGTTCCTCA AGAACGTCAG TGCCGACGAC CAGCGTCGCC TGAGCGAAAA CGACTACCTG
CTCAGGAAGC TGGCCAAGCT TGAGTCCATG ACGGTGTTGA CCGACGGTGC CGAAGCGCCG
CTGTCTGCCA CCGCGCTTGT GGGCGACATG GAAGTGCTGG TGCCGATGGC CGGGTTGATC
GACAAAGGGG CGGAACTCGC GCGCCTGGAC AAGGAAATCC AGCGCCTGCA AGGCGAAGTG
CAACGTGTGG GCGGCAAGCT GTCCAACGCA GCATTCGTTG ACAAAGCGCC GCCTGACGTC
ATCGCCAAGG AACGCGCCAA GCTGACCGAG GCCGAACAGG CACTGGGCAA ACTGGCCGAG
CAACACGCGC GCATCGCCAG CCTGTAA
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| Protein sequence | MDKTYQPHAI ETSWYQTWES ENYFAPQGAG DSYTIMIPPP NVTGSLHMGH GFNNAIMDAL
IRFRRMQGRN TLWQPGTDHA GIATQMLVER RLEAQGVSRH ELGREKFLDK IWEWKAESGG
NISRQIRRLG SSVDWSRERF TMDDGLSDAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI
SDLEVENHDE KGHLWNLRYP LADGAKTAEG LDYLIVATTR PETMLGDAAV AVNPQDERYK
ALIGKFVELP LVGRRIPIIA DDYCDPEFGT GCVKITPAHD FNDYEVGKRH NLPLLNIFDK
NANVLPAAQV FNLDGKLNES VDGTLPAAYA GLDRFEARKQ IVAAFDAAGL LVSIDDHALK
VPKGDRSGTI IEPWLTDQWY VSTKPLAEPA IAAVEDGRIA FVPKQYENMY FSWMRDIQDW
CISRQLWWGH RIPAWYDESG KVYVGRDEAE VRAKNNLGPE IALQQDNDVL DTWFSSGLWT
FSTLGWPEKT KALETFHSTD VLVTGFDIIF FWVARMIMLT LHLVKNEDGT PQVPFKTVYV
HGLVRDGQGQ KMSKSKGNVL DPLDIVDGID LETLVEKRTS GLMQPQLAKK IEKQTRQEFA
DGIASYGTDA LRFTFCSLAS TGRDIKFDMG RVEGYRNFCN KIWNAARYVL DKGEDCGQNG
EAVELSLADR WIISQLQRTE AEVTRQLDQF RFDLAAQALY EFIWNQYCDW YLELSKPVLW
DETASIERQR GTRRTLVRVL EVALRLAHPF MPFITEEIWQ RLAPLAGVEG KTIMLQPWPV
ANEARIDQAA EDDIEWLKGL MLAVRNIRGE MNIGPGKPLQ LFLKNVSADD QRRLSENDYL
LRKLAKLESM TVLTDGAEAP LSATALVGDM EVLVPMAGLI DKGAELARLD KEIQRLQGEV
QRVGGKLSNA AFVDKAPPDV IAKERAKLTE AEQALGKLAE QHARIASL
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