| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1235 |
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| Symbol | algI |
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| ID | 1182871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1354537 |
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| End bp | 1356093 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392610 |
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| Product | alginate biosynthesis protein AlgI |
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| Protein accession | NP_791065 |
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| Protein GI | 28868446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.924839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTCT CATCCAACGT GTTCCTGTTC ATGTTCCTGC CGATCTTCCT CGGCTTGTAC
TACCTGAGCG GGCAACGCTA TCGCAATCTG CTGCTGCTGA TTGCCAGCTA TATCTTCTAC
GCCTGGTGGC GTGTGGACTT CCTGGCGCTG TTCATCGGCG TGACCGTCTG GAACTACTGG
ATCGGCCTCA AAGTGGGCGC AGCAGGTGTG CGGACCAAAC CGGCACAGCG CTGGCTGCTG
CTCGGCGTGA TCGTAGACCT GTGCATTCTG GGCTACTTCA AATACGCCAA CTTCGGCGTG
GACAGCATCA ATGCGGCCAT GACCTCGATG GGCCTGGAAC CGTTCATCCT GACCCACGTG
CTGCTGCCGA TCGGGATCTC GTTCTATGTC TTCGAGTCCA TCAGCTACAT CATCGACGTG
TACCGCGGCG ATACCCCGGC CACTCGCAAC CTGATCGACT TCGCGGCATT CGTTGCGATC
TTCCCGCACC TGATTGCCGG GCCCGTGCTG CGTTTCCGTG ATCTGGCCGA TCAGTTCAAC
AACCGGACCC ACACGCTGGA CAAGTTCTCC GAGGGCGCCA CGCGATTCAT GCAGGGCTTC
ATCAAGAAAG TGTTCATCGC CGACACCTTG GCCATTGTCG CCGACCACTG CTTCGCCCTC
CAGAACCCGA CCACGGGTGA TGCCTGGCTC GGTGCGCTGG CCTACACCGC GCAGCTTTAT
TTCGACTTCT CCGGTTACAG CGACATGGCG ATTGGCCTGG GCCTGATGAT GGGTTTCCGC
TTCATGGAAA ACTTCAAACA GCCTTACATC AGCCAGTCGA TCACCGAGTT CTGGCGTCGC
TGGCACATCA GCCTGTCCAC CTGGCTGCGT GACTACCTGT ACATCACCCT GGGCGGCAAC
CGTGGCGGCA AGGTCGCGAC CTATCGCAAC CTGTTCCTGA CCATGCTGCT GGGCGGTCTG
TGGCACGGTG CCAACGTCAC CTACATCATC TGGGGTGCCT GGCACGGCAT GTGGCTGGCC
ATCGAGAAAG CGGTCGGCAT CAACACCAAG CCTTACAGCT TCAATGTGAT CCGCTGGGCT
CTGACCTTCC TGCTGGTCGT GATCGGCTGG GTGATCTTCC GCTCTGAAAA CCTGCACGTG
GCCGGCCGTA TGTACGGTGC CATGTTCAGC TTCGGCGACT GGCAGTTGTC CGAACTCAAC
CGCGCCAGCC TGACCGGCCT GCAAGTGGCA ACGCTGGTAG TGGCTTACGC GACCCTGGCG
TTCTTCGGCC TGCGTGACTT TTACCAGAAC CGTGAAAAAG ACAGCGGCAA GAGCGCCAGG
GCCGACGGTC CTGCGACCGA GCAACCGGGC ACCATCAAGG CCGTACCCGG CGACGCACCT
GGCAGCCTGC ACCTGCCCGG CTACACCGTG GGCAGCGAAG CTCAGGTGCA ACCGGCCTAC
TGGGTCGCCG ACTGGCCACG TTACGCCATG CGCGCACTGA TCCTGCTGCT GTTCGTGGCA
TCGATTCTCA AACTCTCGGC GCAAAGCTTC TCGCCGTTCC TTTACTTCCA GTTTTGA
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| Protein sequence | MVFSSNVFLF MFLPIFLGLY YLSGQRYRNL LLLIASYIFY AWWRVDFLAL FIGVTVWNYW
IGLKVGAAGV RTKPAQRWLL LGVIVDLCIL GYFKYANFGV DSINAAMTSM GLEPFILTHV
LLPIGISFYV FESISYIIDV YRGDTPATRN LIDFAAFVAI FPHLIAGPVL RFRDLADQFN
NRTHTLDKFS EGATRFMQGF IKKVFIADTL AIVADHCFAL QNPTTGDAWL GALAYTAQLY
FDFSGYSDMA IGLGLMMGFR FMENFKQPYI SQSITEFWRR WHISLSTWLR DYLYITLGGN
RGGKVATYRN LFLTMLLGGL WHGANVTYII WGAWHGMWLA IEKAVGINTK PYSFNVIRWA
LTFLLVVIGW VIFRSENLHV AGRMYGAMFS FGDWQLSELN RASLTGLQVA TLVVAYATLA
FFGLRDFYQN REKDSGKSAR ADGPATEQPG TIKAVPGDAP GSLHLPGYTV GSEAQVQPAY
WVADWPRYAM RALILLLFVA SILKLSAQSF SPFLYFQF
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