14 homologs were found in PanDaTox collection
for query gene PSPTO_1175 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1175  hypothetical protein  100 
 
 
198 aa  397  9.999999999999999e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4820  hypothetical protein  32.65 
 
 
227 aa  82  0.000000000000006  Pseudomonas putida F1  Bacteria  normal  0.793839  normal 
 
 
-
 
NC_003910  CPS_3019  hypothetical protein  27.47 
 
 
191 aa  77  0.0000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0620  hypothetical protein  26.86 
 
 
194 aa  76.6  0.0000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0647  hypothetical protein  26.86 
 
 
194 aa  76.6  0.0000000000002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4278  hypothetical protein  28.92 
 
 
200 aa  73.6  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0534  hypothetical protein  27.69 
 
 
197 aa  65.5  0.0000000006  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3589  hypothetical protein  27.22 
 
 
197 aa  65.1  0.0000000006  Shewanella sp. ANA-3  Bacteria  normal  0.348708  normal 
 
 
-
 
NC_009656  PSPA7_4243  hypothetical protein  26.74 
 
 
206 aa  62.8  0.000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.833111  n/a   
 
 
-
 
NC_008463  PA14_49810  hypothetical protein  26.63 
 
 
195 aa  61.6  0.000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2363  hypothetical protein  38.81 
 
 
1028 aa  56.6  0.0000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.429657 
 
 
-
 
NC_010830  Aasi_1361  hypothetical protein  25.97 
 
 
540 aa  53.5  0.000002  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_0216  hypothetical protein  24.19 
 
 
207 aa  48.1  0.00007  Pseudomonas putida W619  Bacteria  normal  0.636809  normal  0.332624 
 
 
-
 
NC_008700  Sama_1597  hypothetical protein  32.91 
 
 
1042 aa  46.2  0.0003  Shewanella amazonensis SB2B  Bacteria  normal  0.229285  normal 
 
 
-
 
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