Gene PSPTO_1175 details

Gene Information

• Locus tag: PSPTO_1175
• ID: 1182811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1290659
• End bp: 1291255
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637392552
• Product: hypothetical protein
• Protein accession: NP_791007
• Protein GI: 28868388

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGATT TAATATATGC GCCCCCGAAA GCCAGCCTGG ATAAGGATGA GTCAGGCAGT 
GGCGGCCCGG AGTTTTATGT CGTGTCGTTA CAGAAGTTTT TCATTCTATA TTTTTTGACG 
TCGGGTTTTT TCGCGACTTA CTGGTTTTAT CGAAACTGGT CGCTGAACAA GAAGTTTTCG 
GGCAGCAATG TGTGGCCTGT TGCGCGCGTG ATCTTTGCCG TTATTTACGC TTTTCCACTG 
TTTCTTACGG TGGATAAAAG TCTGCGGCGG CAGGGTCTTG GTCACATGGC GTACTGGGCG 
GTTAGCGCCT CGGTGCTGCT GGCATTGACC ATTGCGGGAA TCCTGCTGGC GCAGGGTGTG 
TCAGGGAATT TGCGATTCGA ACTGGTCGGT GGCTGGCTGG TATGGGTTGT TCTGCTGGCC 
ACTGCGCAGA CGCTTAATAT GATGCTGGTA CAGTCGAAGA TAAATGCCGC CGCGCATGAC 
GCGGACGGGA GCACCAACTC AAGGTTGACG CTTGCCAATG GCTTGTGGAT TGTTATCGGA 
TGTGCCATGT GGTTGGTCAG TATACCGACC TATCTTTCCG CTTCTGCTTT AGGCTAG 

 

Protein sequence

MSDLIYAPPK ASLDKDESGS GGPEFYVVSL QKFFILYFLT SGFFATYWFY RNWSLNKKFS 
GSNVWPVARV IFAVIYAFPL FLTVDKSLRR QGLGHMAYWA VSASVLLALT IAGILLAQGV 
SGNLRFELVG GWLVWVVLLA TAQTLNMMLV QSKINAAAHD ADGSTNSRLT LANGLWIVIG 
CAMWLVSIPT YLSASALG