| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1157 |
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| Symbol | |
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| ID | 1182793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1270254 |
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| End bp | 1271405 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392536 |
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| Product | bacterial luciferase family protein |
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| Protein accession | NP_790991 |
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| Protein GI | 28868372 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03612] pyrimidine utilization protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCCGCT TAATGCAAAC GATCGATCAA GTGCTCTGGC ACGCATCGAT CAACGCAGAG
AGGCCTCATA TGGACATCGG TATCTTCATC CCCATCGGCA ACAACGGCTG GCTGATTTCC
AGCAACGCAC CGCAGTACAT GCCGACGTTC GAGCTGAACA AACAGATCGT GCAGACAGCC
GAAAGCTACG GTTTCGACTT TGCGTTATCG ATGATCAAAC TGCGCGGCTT TGGCGGCAAG
ACCGAGTTCT GGGAGCACAA CCTGGAGTCT TTCACGCTGA TGGCGGGGCT GGCGGCAGTG
ACCAGCAAAA TCCAGCTGTT CGCCACCGTG GCCACTTTGA CCATTCCGCC TGCCATCGCA
GCGCGCATGG CCTCGACCAT CGATTCGATC TCCAACGGGC GCTTCGGGAT CAACCTGGTC
ACCGGCTGGC AAAAGCCTGA GTACGAGCAG ATGGGCCTGT GGCCCGGCGA CGAGTTTTTC
CATACCCGTT ACCAATACCT CGCCGAATAC GCCCAGGTCC TGCGCGACCT GTGGGCCAAC
GGCAGCAGCG ACTTCAAGGG CGAGCATTTC AGCATGCAGG ACTGCCGCGT GAGCCCGCGC
CCGCAGGCCG ACATGAAGCT GATCTGCGCC GGTCAGAGCG AAGCCGGCAT GGCATTCTCG
GCGCAATACG CCGACTACAA CTTCTGCTTC GGCAAAGGCG TGAATACCCC CACCGCTTTC
GCGCCGACCG CACAGAAACT GATCGAAGCC AACGAAAAAA CCGGGCGTAA CGTGACTTCC
TGCGTGCTGT TCATGATCAT CGCCGACGAC ACCGATGAGG CCGCACGGGC TCGCTGGGAC
CACATAAAAG CAGGCGCCGA CGAAGAAGCC ATCGCCTGGT TGAGCGAAAA AGGCGCGGCG
GACAAGAGCG CAGGATCGAA CCTACGGCAG ATGGCCGACC CGACTTCGGC GGTCAATATC
AATATGGGCA CGCTGGTGGG CTCCTGGGCC AACGTGGCGA AGATGCTCGA CGAAGTCGCC
AGTGTGCCGG GTACTCAAGG CGTGATGCTG ACCTTCGATG ATTTTGTGAA AGGCGTCGAA
GATTTCGGGC AGAAAATCCA GCCATTGATG ACCAGCCGCA CGCACATCAC CCAGCTCAAG
GAGGTGGTTT GA
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| Protein sequence | MARLMQTIDQ VLWHASINAE RPHMDIGIFI PIGNNGWLIS SNAPQYMPTF ELNKQIVQTA
ESYGFDFALS MIKLRGFGGK TEFWEHNLES FTLMAGLAAV TSKIQLFATV ATLTIPPAIA
ARMASTIDSI SNGRFGINLV TGWQKPEYEQ MGLWPGDEFF HTRYQYLAEY AQVLRDLWAN
GSSDFKGEHF SMQDCRVSPR PQADMKLICA GQSEAGMAFS AQYADYNFCF GKGVNTPTAF
APTAQKLIEA NEKTGRNVTS CVLFMIIADD TDEAARARWD HIKAGADEEA IAWLSEKGAA
DKSAGSNLRQ MADPTSAVNI NMGTLVGSWA NVAKMLDEVA SVPGTQGVML TFDDFVKGVE
DFGQKIQPLM TSRTHITQLK EVV
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