| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1151 |
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| Symbol | |
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| ID | 1182787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1263491 |
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| End bp | 1266223 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392530 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | NP_790985 |
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| Protein GI | 28868366 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC TGTCCCGAAT GCAAGGGTTC GCAGACAGCG CGATTCCTGC GTTGGAAGGA
CGATTTTTCC GTCCGCCCCT GCCTGAAGGT TACGTTCCCC GTTCCCGCCT GTGTCAGCGC
CTCAATGAGG GGCTGGGCGG GCGTCTGCTG CTGGTGTGCG CGCCGGCCGG GTTTGGGAAG
AGTTCGCTGG CGGTCGAGTT CTGCCAGGGC TTGCCGGACC AATGGCAGAA CGTATGGCTG
GGGCTGAGTG CGCGGGACAG TGAGCCGGGG CGCTTCCTTG AACGTTTGCT GGGCAGCCTG
CAGCAGTTCT TTCCGCAACT GGGCGCGCAG GCGATGGGCC TGCTGAAGAT GCGTCAGCGT
CATCAGCCGT TCGCGTTCGA AGAATGGCTC GACAGCCTGC TTGATGAACT GGCCATGCAC
CTGATGTTGA GCAAGCCGCT GTTGCTGGTG CTCGACGACT ATCATCTGGC GCAAGGGCCG
GTGCTCGATC GCTGTTTGCA GTTTTTCCTC AATCATCTGC CGGCCGGGCT GGTGGTCATG
GTCACCAGCC GGCAACGGCC TGACTGGCAC CTGGCGCGTT TGCGTCTGAC CCGTCAGTTG
CTTGAAATCA ACGAGCAGGA CCTGCGCCTC ACCCAGGCTG AATCCATGGC GGTGCTGGAC
CGGCACAGCC GTTCGCTCGA CAGTGAAGCG CTACAAAGCC TGATTCTGCG CAGCGAAGGC
TGGGTGGCCG GGTTGCGCTT CTGGTTGCTG GCGGCCTCTG AAGCCGGCGA TGAAAGTGCC
CTGTCGCAAG CGCTGCGCGG CAGTGAAGTG CTGATTCGCG AGTACCTGCT TGAAGAAGTG
ATCGACTGCC TGCCTGCCGA TGTTCAGGCA TTTCTCTATG ACACCGCGTG CCTGGAGCGT
TTTTGCGCCG AGTTGTGCAA CGCCGCGCGA GACAGTCATG ACAGTGTCGA GATGCTCCGT
TATCTGCAGG CGCATCAGGT GTTTCTGGTG CCGCTGGACG AGCAGGGCCG CTGGTTTCGT
TATCACCACC TGTTTTCCGA TCTGTTGCGC GCCCGCCAGA CGGCCGATGC GCAAACCACC
CGTCTGCACC TCAACGCCTG CCGCTGGTTC AGCGCTCAGG GCCAACTGGA CGAGGCGGTC
GAACAGGCGT TGCGCGCCGG GCATCTGGAT GTGGCGGCCA ATCTGGTGCA GAACCTTTCC
GAAGAGCAAC TGCTGGCCGA ACAGAATGTC GGCATGCTGC TGCGTTGGAA AATGGACCTG
CCGGACGACC TGCTGACCAG TACGCCACGC CTGATCGTAC TGTACGCATG GGCACTGGGG
CTGGCCTGCC AGCTGGACGC CGCCGAAGAG CTGGCCAATC AGTTGAGCCG TTTCCTGCCG
GCGCCCTCGG CGACCGCGCA GAAGTCCATG CTTGCGCAGT GGCTGGCGCT CAGCGGTATC
ATCGCGCGTG GGCGCGGTGA CAGCGAGAAG ACCGAACGCT ATTGCCGTGA AGCCCTGCTG
ACCTTGCCGC AAAGGCGCTA CGGCCAGCGG CTGGTCTGCC TGTCGACGCT GGCCAACCTT
GCGGTGGCCG AGGGCGACCT GTGGCAAGCG CGCGTGCTCA ATCGCGATGC ACTGGAACTG
GCGCAACGGG TTGCAAACCC GCTGTTCGAG GCCCTGGCGC ATTACGACCG CGCGAGAGTC
CTGCAGGCGC GAGGCGAAAT CATCCGTGCC CTTGAGGAAG TGCGCCAGGG GCAACAGCGC
CTCAAGGGTT TGTCCACCGT GCGCTTGTAC GCTGTTCGCG CGCGTCTGAC GTTGTACGAA
GGGTACCTGC TGGCCCTGCG TCTGCAAGTG GACGAAGGGC GGGCCTTGTT GCTGGCCGGT
CTGGCCGAGG CACGCGCCTG CCGTGACATC AGTGTGCTGA TCGGCCACTG CGTGATCGCA
ACGATGGAAG GCTTTGCCGG ACGCTTTGCC GAAGCCTTCG CCGAACTTGC CGAAGCCGAA
CGCCTGATGC ACATCTGGGA CGTGCCGCCC ATCTACTACC TGGCGATGAT CACCCTGGTC
AAATGCGAGC TGTGGCTGAT ACAGGGGCGC ATCGATCTGG CTGAAGCCTG GCTGCTGCGC
CTGACCCAGA CCTACAATGG CGGGCTCGGT GCCGCAGCGC CGGAGTGTCA TCCGCAGTTG
TCGCAACATA TCGAATTGCA ACGTGCCGTG CTGGAGCGGA TACAGGGTGA TGAGGTTGCC
AGCGAGCAGC GTTTGCAGGC ACTTGAGCAA CGGGCGCAGG AGGTGGGCGC GCAACTGCTG
AGGCTGATCG CCATGACCCA GCAAATAGCG CTGTTGCTCA ATCAGGGGCG ACAGGATGAA
GCCCGGACGC TGCTGATACG CAGCGTTCAA GCCTCGGCGG GTGGCGCGCT GTTGCCCTTC
AGGGTTTTGC TGGCCGAACA TTCCCAATGG TTGCACGAGC AACTGCAACT GGCACCGTCC
TGCAAACTGT GCAATGCCCT GCGGGAAAAA TTCCCGGCCT GCTTCAAACC GGCGGCGCCT
GAGCCTGCGC ATGGCAGCGA CTGCCTGAGT GTGCGTGAGC TGGGTGTGCT GCGATTGATT
GCGCAGGGGT GTTCCAATCA GGAAATCAGC GAGCAGTTGT TCATTTCCCT ACACACCGTC
AAGACTCACG CCAGCCACAT CAACAGCAAA CTGGGCGTCG AGCGGCGTAC TCAGGCGGTG
GCGAGGGCGA AGATTCTTGG CTTGCTGGGC TGA
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| Protein sequence | MTDLSRMQGF ADSAIPALEG RFFRPPLPEG YVPRSRLCQR LNEGLGGRLL LVCAPAGFGK
SSLAVEFCQG LPDQWQNVWL GLSARDSEPG RFLERLLGSL QQFFPQLGAQ AMGLLKMRQR
HQPFAFEEWL DSLLDELAMH LMLSKPLLLV LDDYHLAQGP VLDRCLQFFL NHLPAGLVVM
VTSRQRPDWH LARLRLTRQL LEINEQDLRL TQAESMAVLD RHSRSLDSEA LQSLILRSEG
WVAGLRFWLL AASEAGDESA LSQALRGSEV LIREYLLEEV IDCLPADVQA FLYDTACLER
FCAELCNAAR DSHDSVEMLR YLQAHQVFLV PLDEQGRWFR YHHLFSDLLR ARQTADAQTT
RLHLNACRWF SAQGQLDEAV EQALRAGHLD VAANLVQNLS EEQLLAEQNV GMLLRWKMDL
PDDLLTSTPR LIVLYAWALG LACQLDAAEE LANQLSRFLP APSATAQKSM LAQWLALSGI
IARGRGDSEK TERYCREALL TLPQRRYGQR LVCLSTLANL AVAEGDLWQA RVLNRDALEL
AQRVANPLFE ALAHYDRARV LQARGEIIRA LEEVRQGQQR LKGLSTVRLY AVRARLTLYE
GYLLALRLQV DEGRALLLAG LAEARACRDI SVLIGHCVIA TMEGFAGRFA EAFAELAEAE
RLMHIWDVPP IYYLAMITLV KCELWLIQGR IDLAEAWLLR LTQTYNGGLG AAAPECHPQL
SQHIELQRAV LERIQGDEVA SEQRLQALEQ RAQEVGAQLL RLIAMTQQIA LLLNQGRQDE
ARTLLIRSVQ ASAGGALLPF RVLLAEHSQW LHEQLQLAPS CKLCNALREK FPACFKPAAP
EPAHGSDCLS VRELGVLRLI AQGCSNQEIS EQLFISLHTV KTHASHINSK LGVERRTQAV
ARAKILGLLG
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