Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1115 |
Symbol | |
ID | 1182751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1229099 |
End bp | 1229602 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392494 |
Product | hypothetical protein |
Protein accession | NP_790949 |
Protein GI | 28868330 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAT CACTCGCCAA TGCGCTGTTG TTCCAGATCG GCTGGTTTGC CTGCGTGCTG GGTGGCAACA GCTATTGGCT GTTGATCGCC GTGGGTGTGC TGGTAGTGCA CTTTGCGTGG GTCAGTTCAT GGGCAGCTGA AGGCAAGCTG ATTGTGAGCG TCACGCTGGT GGGTGTGGTG ATCGACAGCC TGTTGATGGT GCTCGGTGTT TTCGACTTCG AGACCGGCGG CTATCTGCTT CCGTTGTGGC TGGCGTTATT GTGGGCGGTC ATGGGCACCA CGCTCAATCA CTGCCTGGCA TGGACCGCCA AGCCCATCTG GCGCGCTGCC GTACTGGGCG CTATTGGCGG GCCGATGTCG TACTATGCCG GCTCGCAACT GGCGCAGGTT CATCTTCCTC TTGGATTTTG GCCAAGCATG GTGCTGCTGG GGCTGGTCTG GGCGGGTGTA TTCCCGCTGC TGCAATGGCT GGCCGCCCGC GCACCAGGCC CGTCAGCCAG ATAA
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Protein sequence | MLKSLANALL FQIGWFACVL GGNSYWLLIA VGVLVVHFAW VSSWAAEGKL IVSVTLVGVV IDSLLMVLGV FDFETGGYLL PLWLALLWAV MGTTLNHCLA WTAKPIWRAA VLGAIGGPMS YYAGSQLAQV HLPLGFWPSM VLLGLVWAGV FPLLQWLAAR APGPSAR
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