Gene PSPTO_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1115 
Symbol 
ID1182751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1229099 
End bp1229602 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID637392494 
Producthypothetical protein 
Protein accessionNP_790949 
Protein GI28868330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAT CACTCGCCAA TGCGCTGTTG TTCCAGATCG GCTGGTTTGC CTGCGTGCTG 
GGTGGCAACA GCTATTGGCT GTTGATCGCC GTGGGTGTGC TGGTAGTGCA CTTTGCGTGG
GTCAGTTCAT GGGCAGCTGA AGGCAAGCTG ATTGTGAGCG TCACGCTGGT GGGTGTGGTG
ATCGACAGCC TGTTGATGGT GCTCGGTGTT TTCGACTTCG AGACCGGCGG CTATCTGCTT
CCGTTGTGGC TGGCGTTATT GTGGGCGGTC ATGGGCACCA CGCTCAATCA CTGCCTGGCA
TGGACCGCCA AGCCCATCTG GCGCGCTGCC GTACTGGGCG CTATTGGCGG GCCGATGTCG
TACTATGCCG GCTCGCAACT GGCGCAGGTT CATCTTCCTC TTGGATTTTG GCCAAGCATG
GTGCTGCTGG GGCTGGTCTG GGCGGGTGTA TTCCCGCTGC TGCAATGGCT GGCCGCCCGC
GCACCAGGCC CGTCAGCCAG ATAA
 
Protein sequence
MLKSLANALL FQIGWFACVL GGNSYWLLIA VGVLVVHFAW VSSWAAEGKL IVSVTLVGVV 
IDSLLMVLGV FDFETGGYLL PLWLALLWAV MGTTLNHCLA WTAKPIWRAA VLGAIGGPMS
YYAGSQLAQV HLPLGFWPSM VLLGLVWAGV FPLLQWLAAR APGPSAR