| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1093 |
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| Symbol | |
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| ID | 1182728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1201509 |
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| End bp | 1203926 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637392471 |
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| Product | relaxase/mobilization nuclease domain protein |
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| Protein accession | NP_790927 |
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| Protein GI | 28868308 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.246621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGA AGGTGCCCGA CAAGCGCAAC GATGGAAAGA GCAGCTTTAA AAGTCTGCAA
AAGTACATTG AGGAGCGCGA CGTTATCGAC TCGGAAACCG GCGAGATTAC GGGACGGTTG
CGTCACAGGC TGTCAGTCGA GACGAACTGT TTAGACCGTG ACACTGCTTG GCGTGAAATG
CTGGCTGTTG CGGACATGAA TGGTCGGGTT AAAGATCCGG TCTACCACGC GGTTATCTCT
TGGCAGAAGG ACGAGAAGCC TACAGATAGG CAAGCGTTCG AGGCATGCCA AGTGGCAATG
GTGGCGATAG GCATGCAGGA CCACCAGTTC GTTGCCGCTG TACATCGTGA TACCGATAAT
CATCATGTAC ATTTAATGGT CAATCGTGTG AATCCTGAAA CCTACAAGGC TGTTTACCCA
GACCGGGACT TTTACAAGCT CGACAGAACA ATGAGGGAGA TTGAGCTTAG CCAAGGATGG
AAGCATGATA ACGGACCGTT TTCTGTTCAT GAAAGGGACG GAAACAAGGT TGTAGATTGG
GCTAAGAGTT CGGCAAAAGA GTACCGTAAG GAGCAGGCAG AGAAGCGCAC ACGCCGTCCT
ACTAAGGTCA AAGATATGGA GCAGCATATG GGTAATGAGT CGCTTTACTC ATATGCGCAG
GCTGAGCCGA AAAATGACGC TAAAGCAGTG TTACAAAAGC TTGATTCTTC TTGGCAGTCC
CTACATCGTG TTTTGGCTAA GCATGGTTTG GAGCTTCGGC CTACAAGTGA CAAGATGAAT
GCGTTCCGAG TGCATAGCGC TGCAGACCCA AGAATCTGTA TCAAGGCGTC CGCTATGGAG
CTTGGCGGCG GCAAACTTAT AAAGCAGCTT GGCCCGTATG AACAATTTCA AACCCGGTAC
TTTGATCGGG GCGCGGCAGA GAAGCAGACC TACAGCAAGC ATCGTCCGTT GCGTGATCCA
GCTAAGCGAA CAGAAAACCG TGAGAAGCGA GCCAAAGAAC GCGCAGAGCT GCGTGGTAAG
TATGACGGGT TTGTTGATGA GTGGAAGGTC ACGAAAGCCC CGGCTAAAGC TGAACTAGCC
AATAGCCACA AGCTACGTCT TAAGTCGCTC ACAGATCAGT ATAAGGCAAC GAGGGAAGCG
ATCCGAAGAA GCGGGGTATA TGGCAATCAG CGTAAAGCAC TTACATCTGT GGCAGCGTTT
ACGGTTGCGG CCAAACGAGA CGAATTAAAG GCTTTAATTA AGGCCGAAAA TACCAGTTTC
AGAAAAGAGA AATGCCCCTC TTATCGGGAC TGGGTGACAG ATCGTGCAGA GGCTGGCGAC
CCGGCGGCCA TAGCGCAGCT TCGGGGATTT GCCTACGCAG ATAAACGCAA AAGCAAACGG
CAGGAAGAGC CAGATATTGC AGACGTACAG CGGCCATATT TTGCGGCTAC TTCGGATAGC
GATCTTGACC CAGCACGGCC TGTAAGGCTT TCTGAGCGTG TTACGTGGAC TGTTGATCGG
TCGACTGGTG CTGTTAACTA TTCGGTCAAT GATCGGTTAG CGTTCCGGGA TGAAGGACAG
CGCATCACTT TCAACCAGGA CAGCCGCAAC GATGCGGATA GCATCGAGAT GGGGTTGCTG
CTGGCGAAGG AGAAATTCGG CGCTGTAGCG GTGCACGGCG GGCAGGAATT CAGGGAAAGG
GTGCTTGCGA CCGCGGTTGA GCGACGGCTG GATGTGCGGT TTGCTGATCC TGAGCTTGAA
CAGCAACGCA AAGATGCCAT CAAGGCCGAC ATTGACCAGA AGCGTCAGCG CTTCATAGAG
GATCAACAGC AGGTCGATGT TATCCGTGCG CAACACGAGG CCAAGAAAGC GCCCCGGCAG
GCTGCTATGA CGCGAGATGA GGCGCAGCAG GCGCTATCAG CACCGGCACC GGTTCGGCCA
GTCCGTGATT ATGTTGAGAT GGATGCTGTC GAGGCTGATG TGGCTCAGTA TCGGTCTAGA
TTGAATCGTA CACACCGGGA GTTGTGGGGT AAGCGGCCAG ACCCGGAGAA GGCGGGCGGC
TTCATTGGCC GACACATGGC GAAGGGCAAG GCCATGCAGT GGGACAATGA TTTTGGCAAG
AACGTAGAGC GCCCATCCGA GGCTCGGTGC GATCACTTAA ACAGCCATCA TCCCGACGCT
ATTAAGTTTA GAGATGATGC GTGGAGTCAG GCGTTAAAAA CGCATGATTC ATCAGTAAGT
GCTTGGACAA AAAAGTGCGA TTATGCGATG CAAACGTTGA TGAATACGCA CGTTGATAGT
GAGCCAGCAG CACCGAATCA GGACGATCAG CGAGCAGCAC GGCAGACCGA AGCTCAGCGG
TTGCAGCAGC GTCAGGAAGA GCAAGAGCGT GAGCGTCAGA ACTCATTGAA CCGGGACTCG
CCGGATTTGG ATATGTGA
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| Protein sequence | MLAKVPDKRN DGKSSFKSLQ KYIEERDVID SETGEITGRL RHRLSVETNC LDRDTAWREM
LAVADMNGRV KDPVYHAVIS WQKDEKPTDR QAFEACQVAM VAIGMQDHQF VAAVHRDTDN
HHVHLMVNRV NPETYKAVYP DRDFYKLDRT MREIELSQGW KHDNGPFSVH ERDGNKVVDW
AKSSAKEYRK EQAEKRTRRP TKVKDMEQHM GNESLYSYAQ AEPKNDAKAV LQKLDSSWQS
LHRVLAKHGL ELRPTSDKMN AFRVHSAADP RICIKASAME LGGGKLIKQL GPYEQFQTRY
FDRGAAEKQT YSKHRPLRDP AKRTENREKR AKERAELRGK YDGFVDEWKV TKAPAKAELA
NSHKLRLKSL TDQYKATREA IRRSGVYGNQ RKALTSVAAF TVAAKRDELK ALIKAENTSF
RKEKCPSYRD WVTDRAEAGD PAAIAQLRGF AYADKRKSKR QEEPDIADVQ RPYFAATSDS
DLDPARPVRL SERVTWTVDR STGAVNYSVN DRLAFRDEGQ RITFNQDSRN DADSIEMGLL
LAKEKFGAVA VHGGQEFRER VLATAVERRL DVRFADPELE QQRKDAIKAD IDQKRQRFIE
DQQQVDVIRA QHEAKKAPRQ AAMTRDEAQQ ALSAPAPVRP VRDYVEMDAV EADVAQYRSR
LNRTHRELWG KRPDPEKAGG FIGRHMAKGK AMQWDNDFGK NVERPSEARC DHLNSHHPDA
IKFRDDAWSQ ALKTHDSSVS AWTKKCDYAM QTLMNTHVDS EPAAPNQDDQ RAARQTEAQR
LQQRQEEQER ERQNSLNRDS PDLDM
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