| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1053 |
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| Symbol | |
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| ID | 1182687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1150183 |
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| End bp | 1151010 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392432 |
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| Product | hypothetical protein |
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| Protein accession | NP_790889 |
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| Protein GI | 28868270 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCGG CTCATACCAC TCAAACTCCC TTCAATCGCC TCCTGCTGAC CGGTGCTGCA
GGCGGCCTGG GCAAGGTATT GCGCGAGACA TTGCGCCCTT ACTCACACAT TCTGCGACTC
TCTGATATCG CCGAGATGGC GCCCGCGGTC GGCGACCATG AAGAAGTGCA GGTCTGCGAT
CTGGCGGACA AAGACGCCGT ACACCGTCTG GTCGAAGGCG TGGACGCCAT TCTGCATTTT
GGCGGCGTGT CGGTCGAACG GCCTTTCGAG GAAATCCTCG GCGCTAATAT CTGCGGCGTG
TTCCATATCT ACGAGGCCGC CCGCCGGCAT GGCGTGAAAC GCGTGATCTT CGCCAGCTCC
AACCATGTGA TCGGTTTCTA CAAGCAGAAC GAAACCATCG ACGCGCACTC CCCGCGCCGC
CCGGACAGCT ACTATGGTTT GTCCAAGTCC TACGGCGAAG ACATGGCCAG CTTCTACTTT
GATCGTTACG GCATCGAAAC CGTCAGCATC CGCATCGGCT CATCGTTCCC TGAACCACAG
AACCGCAGAA TGATGAGCAC CTGGCTGAGC TTCGATGACC TGACCCGGTT GCTCGAGCGC
GCCCTGTACA CGCCGGACGT CGGCCACACC GTGGTGTATG GCGTGTCGGA CAACAAGACC
GTGTGGTGGG ACAACCGCTT TGCCAGCAAA CTGGACTACG CCCCTAAAGA CAGCTCGGAG
GTCTTCCGCG CCAAGGTCGA CGCCCAGCCA ATGCCGGCGG ACGACGACCC GGCAATGGTT
TACCAGGGCG GTGCGTTTGT AGCGTCCGGA CCGTTCGGCG ATAAATAA
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| Protein sequence | MASAHTTQTP FNRLLLTGAA GGLGKVLRET LRPYSHILRL SDIAEMAPAV GDHEEVQVCD
LADKDAVHRL VEGVDAILHF GGVSVERPFE EILGANICGV FHIYEAARRH GVKRVIFASS
NHVIGFYKQN ETIDAHSPRR PDSYYGLSKS YGEDMASFYF DRYGIETVSI RIGSSFPEPQ
NRRMMSTWLS FDDLTRLLER ALYTPDVGHT VVYGVSDNKT VWWDNRFASK LDYAPKDSSE
VFRAKVDAQP MPADDDPAMV YQGGAFVASG PFGDK
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