| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0901 |
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| Symbol | hopAG1 |
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| ID | 1182530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 981500 |
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| End bp | 981958 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637392278 |
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| Product | type III effector HopAG1 |
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| Protein accession | NP_790740 |
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| Protein GI | 28868121 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCCTA TAACACACAG CTTTAGTCAT CTTGGGTTTT CAAACGCTCA AAGTACGTCA
GCGCTGGCGC CCGGCGGTAA TAAAGTGCCG AACTTTGTTT CGCGAGGGCG AGGCAAAGGA
GTCCCGCTTG AGCATTTCAA CACCGCTGAT GAGTATCGTT TGGCACGCCA GCAGGGCGGC
GTGCTGAAAT CAATAGACGG CAGAGAGTTC ATGCTACTGC TGCAGAAGTA CACGGCCGCC
GAAACAAGCG ACGAAGAATT TGCGGATTTG AGGGCCGCCA TACCGCGCTA TTCCATTGAC
CTGGCCGAGC CGGGTCAAAC TAAAGTGCTT TATCGGGGGA TATCGCTGCC GGAGAAGACT
GCGGCGCGAT TACTGAATAT CTCTTGGGGT TACGAAAGTC GCGAAATAGC CCATGGTCTT
ATCCATGGCT TGCGGGTAGT TAAGGAAGGT CTGAAGTAG
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| Protein sequence | MNPITHSFSH LGFSNAQSTS ALAPGGNKVP NFVSRGRGKG VPLEHFNTAD EYRLARQQGG
VLKSIDGREF MLLLQKYTAA ETSDEEFADL RAAIPRYSID LAEPGQTKVL YRGISLPEKT
AARLLNISWG YESREIAHGL IHGLRVVKEG LK
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