Gene PSPTO_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0899 
Symbol 
ID1182528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp980143 
End bp980610 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content55% 
IMG OID637392275 
Producthypothetical protein 
Protein accessionNP_790738 
Protein GI28868119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.606509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTACC CGGTATTTGC GCCGCCCCCG ACGCGCCCTG GGTACAACAG GGTGCAGGAA 
AGCGGACGCG ATCAGGGGCA CTCAACGCTG GACATCGCCC TGATCGGCGT CATAGGCCAG
ATGGCCTGGA ATCAGGGTGA TGATTTATTC GGCTTTGAGA ATAACCTCGT GCTTAAAGCC
AGCGAGTATG TCGCCAAATA CAATCTGGGT TATGACGTTC CCTGGACGTA CTACACGACC
AGCGACGGCA CCGTTCAGAC TGAAATCTCA TCGGCGAGCA GAGGCAGCAC CCGCCCTGTC
TGGACGCTGA TCTACAACCA CTACAACCGG GTCAACGGTC TGGAAGCTAA GTACACCAAG
GAAATGATGG ACAAGTTCGG CCCTGAAGGC GGTGCATATG GCGCAAACAG CGGCGGGTTC
GATCAATTGG GTTATGGGTC GCTGCTGTTT AATTCCGATG TGAAGTAA
 
Protein sequence
MIYPVFAPPP TRPGYNRVQE SGRDQGHSTL DIALIGVIGQ MAWNQGDDLF GFENNLVLKA 
SEYVAKYNLG YDVPWTYYTT SDGTVQTEIS SASRGSTRPV WTLIYNHYNR VNGLEAKYTK
EMMDKFGPEG GAYGANSGGF DQLGYGSLLF NSDVK