Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0898 |
Symbol | |
ID | 1182527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 978514 |
End bp | 980127 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392274 |
Product | sensor histidine kinase/response regulator |
Protein accession | NP_790737 |
Protein GI | 28868118 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.535257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACC GGAAAAACGC TGAACTGGAT CAGGCCACGC TCAGGCTGAT CGTGGCAACC TTTGCGATCA GCTATGTATC GCTGGTCGGC TTCCTGCCAG GGCTCAATGT GGCGAAATAT CAACCGATCA TTCTCTACTA TGCGGGCTTT CTGGTGGTTT CTCTGGTCCT GCGCCAGCAC ATTATCAGTT ACCCCGGTGT ATATGCGGTG CGTCGGGTAC TCGGGATGGT CCATGACTAC ACCGGTATTT CCGTAGGGCT GATTGTGGGA GGAGAGGCGA CACTGCCGAT TTTCAGTGTG ATGGTCTGGG TGACGCTGGG CAATGGCATG CGCTATGGCT CTCGTTATCT GGCAATTGCC GCGTCGCTGG CCCTGCTGGC GATACTGATC ATCTATCAAT TGACGCCTTA CTGGCAGGCA CAGCCGTTCA TGGTGCTGAT GCTGGTCGCC GTTACCATTC TGGTGCCCGG ATACGCTCAT ATTCTGCTGG TGAGAACGCG TGAGGCGTCG GAACAGGCGA CCGTGGCTAC TCGTGAAAAG GAGCGTTTTC TGGCGCAGGC CAGTCACGAT CTGCGTCAGC CCATTCACTC CATCGGTATG TTTACCGCCT GTTTGCGCTC AAGCCCGTTG GGCGATTATG AGCGTCAGTT GGTCGACAAC ATTGATCGTT CCCTGCACAA CGTCTCGCAG CTGTTTCGCA CGATTCTGGA CATCTACACA CTGGACAGCG GCAAGGTCTT CGCCAAGTCA GACTTGGTCC ATCTGGGTGA AATGCTCAAT GAGATCGCTC AGCAAAACAC CGCGGCTGCG CGATGGGCGG GAGTGGACCT CAGGGTGCGG CCTTGCAGGC GCTGGGCAAG GGTCGATGCC ACCCTGCTCG CGACGATGGT GCAGAACATT TTGTCCAATG CGCTCAAATA TGCGCCGGAG CATCCGGTGC TGATCGGTGT GCGGCGAAAC AAGGGTGGCC TGTCGATCAG CGTGCATGAT CGTGGGCGCG GCATTGCTGC CGAGCATCTG CCCCGCGTAT GTGAAGAGTT TTACCGGATC CGGCATGCCC GCGACAAAGA CGTGGAGGGC GTGGGGCTGG GGTTGTCCAT CGTCAAGCGG CTCAGTCAGA TTCTCGGCGT AAAGATCAAC ATCGAGTCTG AGGTGGATCG CGGCACGACT GTCACCATTC ATGGCCTTGA AGAAGTGAGC GCGCCGGTGC AGCGCGTGCG CAAAAAACCA TTGGGCGACA GCTTGCTCAA GGGGGTCAGG ATCTGCCTGG TGGAAGACGA CAACAACGTG TTGATGGCCA CCGCGGCGTT GCTTGAACGA TGGGGATGCG AAGTCCAGAC CGCCCGCTCG GCGCAAGGGC TGATTACCGA TTGCGACATC ATCGTCGCCG ATTACGATCT GGGCACAGCG GCCAACGGCC TTGACTGCAT CGAGAGCATA CGAGCGGCGC GAGGCTGGGA TGTGCCGGCA CTGATCGTGA CCGGCAGGGA GGTGGAAGTG GTTCTTGAAT CATTGCAGGG CGCTGAAGTG TCGGTGCTGT CCAAACCGTT GCGCCCCTCC GAGTTGCGCC TGAACCTGCT GTCGGTTCGC GAAAGGCGGG TGAATACGCC CTGA
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Protein sequence | MKDRKNAELD QATLRLIVAT FAISYVSLVG FLPGLNVAKY QPIILYYAGF LVVSLVLRQH IISYPGVYAV RRVLGMVHDY TGISVGLIVG GEATLPIFSV MVWVTLGNGM RYGSRYLAIA ASLALLAILI IYQLTPYWQA QPFMVLMLVA VTILVPGYAH ILLVRTREAS EQATVATREK ERFLAQASHD LRQPIHSIGM FTACLRSSPL GDYERQLVDN IDRSLHNVSQ LFRTILDIYT LDSGKVFAKS DLVHLGEMLN EIAQQNTAAA RWAGVDLRVR PCRRWARVDA TLLATMVQNI LSNALKYAPE HPVLIGVRRN KGGLSISVHD RGRGIAAEHL PRVCEEFYRI RHARDKDVEG VGLGLSIVKR LSQILGVKIN IESEVDRGTT VTIHGLEEVS APVQRVRKKP LGDSLLKGVR ICLVEDDNNV LMATAALLER WGCEVQTARS AQGLITDCDI IVADYDLGTA ANGLDCIESI RAARGWDVPA LIVTGREVEV VLESLQGAEV SVLSKPLRPS ELRLNLLSVR ERRVNTP
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