| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0869 |
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| Symbol | |
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| ID | 1182498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 938532 |
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| End bp | 938897 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392247 |
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| Product | hypothetical protein |
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| Protein accession | NP_790709 |
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| Protein GI | 28868090 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01690] integrative conjugative element protein, RAQPRD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAATCA ATCTCCCCGC GCTCAGAACA ACGTCTTCAC GCGTGCAGAT CTGCTTGACC
GCAGTCCTGC TGTGCACACC GCTGCTGTTT TCCGCGCATG CCCAGGCAGC CGGCACGGCT
TCTGAACAAG CCAATGTGGA AGTGATGATT CGTCAGCTCA ACGCGCTCGA GGCCGTCGCC
CAGCGCAGTG TCGATCTTCC ACAAGACCCG GCCCAACGCT ATCACCTGGA CTATCCCCGG
TTGGTCAGCG ACATCGCGCG CATCCGCCAG GGCTTGCAAG ACTACCTGTC GCCGTCCCGC
GCACAGCCCC GCGACCCCGT GGAGCTATCA GGCCATTACA ACGTCAGCGG TGATCACACG
CCATGA
|
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| Protein sequence | MKINLPALRT TSSRVQICLT AVLLCTPLLF SAHAQAAGTA SEQANVEVMI RQLNALEAVA
QRSVDLPQDP AQRYHLDYPR LVSDIARIRQ GLQDYLSPSR AQPRDPVELS GHYNVSGDHT
P
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