Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0834 |
Symbol | |
ID | 1182463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 905575 |
End bp | 906534 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637392216 |
Product | alcohol dehydrogenase, zinc-containing protein |
Protein accession | NP_790679 |
Protein GI | 28868060 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCTC CTGACGGCGT AGAAATCGAT ATCGTGCTAT CAGGTATATG CGGAACTGAT CTGGCGGTAT TGTCGGGCCG TGAAGGTGGA GAGGTGGGCA TTATACGCGG GCACGAAGCA GTTGGCATTA TTATCGATGT AGGTAAGGAT GTAGTACACC TACAAAAAGG GATGCGGGTG GTGGTTGATC CCAACGAATA CTGTGGCGTT TGCGAACCTT GCCGTCTTGC TAAAACGCAC CTATGCAATG GGGGGGTGAA CGCTGGGTTG GATATCGCAG GTGTCAACAA ACATGGAACT TTTGCCGAGC GCTTCGTTAC TCGTGAGCGT TTTGTGTATC AATTGCCAGA CGATATGAGC TGGGCAGCTG GTGTGTTGGT TGAGCCTGTT GCCTGCATTC TGAATAATAT AGACCAGGCG TTCATTCGAG CGGGAGAGCG TGTGTTGATC CTAGGGTCTG GCCCTATGAG TCTGATTGCG CAGATCGTTC TGCGCTCAAT GGGAGTTGAC ACGCTCGCCA CTGATCGAAA CACACATCGC ATACAGTTCG GCCGCTCACA AAGTCTTGAT GTTATACATG CCGATGATCT TGAGTTGCAG ATGCAGCACC AAGAAAAGTT TGATGTTGTT ATCGATACTG TCGGTAATCA GATCGATACA GCTTCACGCT ACATCGGTCG CGGTGGGAGA ATTGTACTTT TTGGATTTGA TAGTGACTAT CACTACATGC TGCCTGTAAA GTACTTCCTG GTTAACGCTA TCAGTATTAT TTCTGCTGGA GAATACAATC AGCACTTTCC TAGAGCAATT CGTCTTGTGC AAAAACTTCC TGAGCTAGGG CGGCTGGTAA CGCATCGCTA CGTACTAGAA AATCACTCGG AGGTTTTCGA TGCACTTCTG AACGATGCTT CCGCCCCCAA TATAAAAAGC GTATTCACAC CAAATCTCGC TTATCTTTAA
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Protein sequence | MLAPDGVEID IVLSGICGTD LAVLSGREGG EVGIIRGHEA VGIIIDVGKD VVHLQKGMRV VVDPNEYCGV CEPCRLAKTH LCNGGVNAGL DIAGVNKHGT FAERFVTRER FVYQLPDDMS WAAGVLVEPV ACILNNIDQA FIRAGERVLI LGSGPMSLIA QIVLRSMGVD TLATDRNTHR IQFGRSQSLD VIHADDLELQ MQHQEKFDVV IDTVGNQIDT ASRYIGRGGR IVLFGFDSDY HYMLPVKYFL VNAISIISAG EYNQHFPRAI RLVQKLPELG RLVTHRYVLE NHSEVFDALL NDASAPNIKS VFTPNLAYL
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