| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0786 |
|---|
| Symbol | |
|---|
| ID | 1182411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 852746 |
|---|
| End bp | 853510 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637392166 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | NP_790633 |
|---|
| Protein GI | 28868014 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGCTA CTCCTCAGCT TCGTCCTGCT CCGCGCGTTC TTGTCGTGGA TGATCACCGC
AAGATCCGCG ACCCGCTGGC CGTCTATCTG CGCCGTCATT TGTTCGACGT GCGCACGGCC
GAGGACGCGG CGGGTATGTG GCAATTGCTC AGGCAACAGC CGTTCGATGT CGTGGTGCTG
GACGTGATGC TGCCGGACGG CGACGGATTT GAACTGTGCA GCCGTCTGCA TCGACGCGAG
AACATTCCGG TGATTCTGCT CACCGCACGC GACACGTCTG CCGACCGGGT GCGTGGTCTG
GACATCGGGG CAGACGATTA CCTCACCAAG CCGTTCGAGC CGCGCGAACT GGTGGCACGC
ATCAACAGCG TGTTGCGCAG GCGCGGGCCG GTGCCGACGG TCATGGAGGC TACACCTGCC
GAGGCTGCGC TTGCGCCGAC GCAACACTAT GCGTTCGCAG GCCTGAGTTT CATGAGCAGT
ACCGGAACGC TGCGGCGCGG TGACGGCTCG GCGGTCAGGC TCAGCACGGT GGAAGCCCGT
CTGCTGGGCG TACTGCTCTG CCATCCCAAC ACCATTCTCA GTCGCCAGCG CCTGATCGAT
CTGACTGCGC GACCGGGCTG CGAAGTCTAC GACCGCGCTA TCGACCGACA GATCAGCCGC
CTGCGCCGCA AGCTCGATGA CAACCCGCTT GAGCCCCAAT TGCTGCGCAC CATCTGGGGC
GACGGCTACA TGCTCGCGGC CAGCGTCGCA GCGCTCGACG CATGA
|
|---|
| Protein sequence | MCATPQLRPA PRVLVVDDHR KIRDPLAVYL RRHLFDVRTA EDAAGMWQLL RQQPFDVVVL
DVMLPDGDGF ELCSRLHRRE NIPVILLTAR DTSADRVRGL DIGADDYLTK PFEPRELVAR
INSVLRRRGP VPTVMEATPA EAALAPTQHY AFAGLSFMSS TGTLRRGDGS AVRLSTVEAR
LLGVLLCHPN TILSRQRLID LTARPGCEVY DRAIDRQISR LRRKLDDNPL EPQLLRTIWG
DGYMLAASVA ALDA
|
|---|
| |