Gene PSPTO_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0779 
Symbol 
ID1182404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp842459 
End bp843613 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content51% 
IMG OID637392159 
Producthypothetical protein 
Protein accessionNP_790626 
Protein GI28868007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCA ATTTAGCGAA GCGTGGGCCA AGCCAGACTT CAACAAAGTC AACCAGCCAT 
TTTGGGCTGA CGAATCAACC CACAAGGCTA AGCCTAATGA CTGAGTCAAT CCATAGATCT
TATTACGGCT CTCGTGCGTA TAGCCCAGGC AAAACTTTAC GACAAGCACC TGCACTAAAG
AGCCTCCCTA TTTTGTCTGG CGCTACACGT CTGCCTTGGT CCTCGACTCA GGGGACAGTG
CCTATTGAAC TAATGATGAG CCACACACCT GAGAGCATGA GGTTTTGGCA AAAAGCTCAG
GTGGACAAAA TACGGCAGAA AGCTGATAAG ACTTATGTGC CGGCCAAATT TGAATCAGTT
GACTTACATC AAAAATATGA CCAAGAGCGA TTCCGCTTTG CTCAGCTGCC GTTTCAAACG
CAATTATGGT TGTTCATGCA GCAGGGTGGG AAATGGTCTT TCATTATCTT GCTACCTATG
TTTTTGCTTG TAAGTTTTTT GGGTATAAAC AAGCCGGCGG GGTCAGCCTT CACCCTGTAC
GTTAACAATG TTATCGAAAC ATTTCCGATT CTTATGGGAC CTTGGCTGGC CTTTTGGATC
ATTGGCCACG TCGTCATCAA CTACTTTCCC AGAGTCTGGT TCCGCCCCCC AAAAGGCCCA
CTCTGGGAGC TCAATCGCAG AACCGGTCTG GTCACGATCT TCGGCTACAA ACGCCATCGA
AAAGAAGGGG TGATCGACGA GTTCGTCGCG CCGTTCTACG AGTTCGATGC CTACATGATC
ACCACGCATG ATCGTCATGG ACCGTATTAC GGCCTGCTAC TCCAGCATCG CTATGAGGAG
CAGCACATCA ACTTCCATGC GCTGCTCGGC CCGGACGACT TTCAGCAACG CCCCTGCGCA
CTCTGGGACT TCCTGCAAAA CTACATGGAC ACCAGCGGCC CGATTCCGGA CATTCCACTG
TTTGAACCGT ATCGCCATCT GGACCCGGTC ACCGCCATTT ACGATCAGCA GCGCGGCCGC
AACCCTCGCT ACTGGATCGA TATGGACGAC GCCACGTTCA AGGCTGAGGT TGATGCCATG
TGGCAGCGGG TTTATGCGAT TGACACGTTT AGCCGCCCGA ACCTTATGGC GCGGTATGTG
GATTATGGCG TGTGA
 
Protein sequence
MEPNLAKRGP SQTSTKSTSH FGLTNQPTRL SLMTESIHRS YYGSRAYSPG KTLRQAPALK 
SLPILSGATR LPWSSTQGTV PIELMMSHTP ESMRFWQKAQ VDKIRQKADK TYVPAKFESV
DLHQKYDQER FRFAQLPFQT QLWLFMQQGG KWSFIILLPM FLLVSFLGIN KPAGSAFTLY
VNNVIETFPI LMGPWLAFWI IGHVVINYFP RVWFRPPKGP LWELNRRTGL VTIFGYKRHR
KEGVIDEFVA PFYEFDAYMI TTHDRHGPYY GLLLQHRYEE QHINFHALLG PDDFQQRPCA
LWDFLQNYMD TSGPIPDIPL FEPYRHLDPV TAIYDQQRGR NPRYWIDMDD ATFKAEVDAM
WQRVYAIDTF SRPNLMARYV DYGV