Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0779 |
Symbol | |
ID | 1182404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 842459 |
End bp | 843613 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637392159 |
Product | hypothetical protein |
Protein accession | NP_790626 |
Protein GI | 28868007 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCCA ATTTAGCGAA GCGTGGGCCA AGCCAGACTT CAACAAAGTC AACCAGCCAT TTTGGGCTGA CGAATCAACC CACAAGGCTA AGCCTAATGA CTGAGTCAAT CCATAGATCT TATTACGGCT CTCGTGCGTA TAGCCCAGGC AAAACTTTAC GACAAGCACC TGCACTAAAG AGCCTCCCTA TTTTGTCTGG CGCTACACGT CTGCCTTGGT CCTCGACTCA GGGGACAGTG CCTATTGAAC TAATGATGAG CCACACACCT GAGAGCATGA GGTTTTGGCA AAAAGCTCAG GTGGACAAAA TACGGCAGAA AGCTGATAAG ACTTATGTGC CGGCCAAATT TGAATCAGTT GACTTACATC AAAAATATGA CCAAGAGCGA TTCCGCTTTG CTCAGCTGCC GTTTCAAACG CAATTATGGT TGTTCATGCA GCAGGGTGGG AAATGGTCTT TCATTATCTT GCTACCTATG TTTTTGCTTG TAAGTTTTTT GGGTATAAAC AAGCCGGCGG GGTCAGCCTT CACCCTGTAC GTTAACAATG TTATCGAAAC ATTTCCGATT CTTATGGGAC CTTGGCTGGC CTTTTGGATC ATTGGCCACG TCGTCATCAA CTACTTTCCC AGAGTCTGGT TCCGCCCCCC AAAAGGCCCA CTCTGGGAGC TCAATCGCAG AACCGGTCTG GTCACGATCT TCGGCTACAA ACGCCATCGA AAAGAAGGGG TGATCGACGA GTTCGTCGCG CCGTTCTACG AGTTCGATGC CTACATGATC ACCACGCATG ATCGTCATGG ACCGTATTAC GGCCTGCTAC TCCAGCATCG CTATGAGGAG CAGCACATCA ACTTCCATGC GCTGCTCGGC CCGGACGACT TTCAGCAACG CCCCTGCGCA CTCTGGGACT TCCTGCAAAA CTACATGGAC ACCAGCGGCC CGATTCCGGA CATTCCACTG TTTGAACCGT ATCGCCATCT GGACCCGGTC ACCGCCATTT ACGATCAGCA GCGCGGCCGC AACCCTCGCT ACTGGATCGA TATGGACGAC GCCACGTTCA AGGCTGAGGT TGATGCCATG TGGCAGCGGG TTTATGCGAT TGACACGTTT AGCCGCCCGA ACCTTATGGC GCGGTATGTG GATTATGGCG TGTGA
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Protein sequence | MEPNLAKRGP SQTSTKSTSH FGLTNQPTRL SLMTESIHRS YYGSRAYSPG KTLRQAPALK SLPILSGATR LPWSSTQGTV PIELMMSHTP ESMRFWQKAQ VDKIRQKADK TYVPAKFESV DLHQKYDQER FRFAQLPFQT QLWLFMQQGG KWSFIILLPM FLLVSFLGIN KPAGSAFTLY VNNVIETFPI LMGPWLAFWI IGHVVINYFP RVWFRPPKGP LWELNRRTGL VTIFGYKRHR KEGVIDEFVA PFYEFDAYMI TTHDRHGPYY GLLLQHRYEE QHINFHALLG PDDFQQRPCA LWDFLQNYMD TSGPIPDIPL FEPYRHLDPV TAIYDQQRGR NPRYWIDMDD ATFKAEVDAM WQRVYAIDTF SRPNLMARYV DYGV
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