Gene PSPTO_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0709 
Symbol 
ID1182329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp761067 
End bp761789 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID637392084 
Producthypothetical protein 
Protein accessionNP_790556 
Protein GI28867937 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA TTCTTCTGTC AGGCAAAAAG AGCGAAGCGC AGCCCGGCGA TGGCGAGTAC 
CCCGAATACT TGTGCGAGTA CAACGGCAAG CCGTTGATCC ATACGCTGAT CGATAATTGT
GCCGCGCTTG AGCCGCGCAG GATTATCTGC ACGTTCTCGA ATGACGACGT CATCGGTTTG
CACCTGCGCA ACATGGTCCA GCAGATGCAT CCTTCTGCCA GCGTTCTTCC CGTTCACAAC
ATCACCCAAG GCGCTGCCTG CACCGCGCTT CTGGCGAGCG GGCAAATCGA TAACGATGAT
GAGCTGCTGA TCCTCAGCGT CAGTGATTTT CTCGACATAG AACTGCGAGA GGTGCTGCGT
GTTTTTCGGG AAGCGAACGA GGACGCCGGT GTCGTCATCT TCAACTCTCT GCACCCTCGT
TATTCATTTG CACGCCTGGA CAGCGACCAG CGCGTTATCG AGGCCGCCGA AAAGAATCCG
ATCAGTCCTC ACGCCATTGC AGGCATGTAC TGGTTCAAAT CCGGTTCGCT GTTTGTCTCC
GCCGCCAAGG AGATGATTCG CAAGGACGCC AGGGTCAATG ACCACTTCTA CATCGCCCCA
GCCCTCAATG AACTGGTGCT GTTACACAAG AAGATTGGTG CCTACCGGAT TGAACCCCGT
CAGTACCGCC CCTTGAAAAC CCAGAACCAG CTTCACGCGT TTGAAATGGC GGACATTCGA
TGA
 
Protein sequence
MNIILLSGKK SEAQPGDGEY PEYLCEYNGK PLIHTLIDNC AALEPRRIIC TFSNDDVIGL 
HLRNMVQQMH PSASVLPVHN ITQGAACTAL LASGQIDNDD ELLILSVSDF LDIELREVLR
VFREANEDAG VVIFNSLHPR YSFARLDSDQ RVIEAAEKNP ISPHAIAGMY WFKSGSLFVS
AAKEMIRKDA RVNDHFYIAP ALNELVLLHK KIGAYRIEPR QYRPLKTQNQ LHAFEMADIR