Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0709 |
Symbol | |
ID | 1182329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 761067 |
End bp | 761789 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637392084 |
Product | hypothetical protein |
Protein accession | NP_790556 |
Protein GI | 28867937 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA TTCTTCTGTC AGGCAAAAAG AGCGAAGCGC AGCCCGGCGA TGGCGAGTAC CCCGAATACT TGTGCGAGTA CAACGGCAAG CCGTTGATCC ATACGCTGAT CGATAATTGT GCCGCGCTTG AGCCGCGCAG GATTATCTGC ACGTTCTCGA ATGACGACGT CATCGGTTTG CACCTGCGCA ACATGGTCCA GCAGATGCAT CCTTCTGCCA GCGTTCTTCC CGTTCACAAC ATCACCCAAG GCGCTGCCTG CACCGCGCTT CTGGCGAGCG GGCAAATCGA TAACGATGAT GAGCTGCTGA TCCTCAGCGT CAGTGATTTT CTCGACATAG AACTGCGAGA GGTGCTGCGT GTTTTTCGGG AAGCGAACGA GGACGCCGGT GTCGTCATCT TCAACTCTCT GCACCCTCGT TATTCATTTG CACGCCTGGA CAGCGACCAG CGCGTTATCG AGGCCGCCGA AAAGAATCCG ATCAGTCCTC ACGCCATTGC AGGCATGTAC TGGTTCAAAT CCGGTTCGCT GTTTGTCTCC GCCGCCAAGG AGATGATTCG CAAGGACGCC AGGGTCAATG ACCACTTCTA CATCGCCCCA GCCCTCAATG AACTGGTGCT GTTACACAAG AAGATTGGTG CCTACCGGAT TGAACCCCGT CAGTACCGCC CCTTGAAAAC CCAGAACCAG CTTCACGCGT TTGAAATGGC GGACATTCGA TGA
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Protein sequence | MNIILLSGKK SEAQPGDGEY PEYLCEYNGK PLIHTLIDNC AALEPRRIIC TFSNDDVIGL HLRNMVQQMH PSASVLPVHN ITQGAACTAL LASGQIDNDD ELLILSVSDF LDIELREVLR VFREANEDAG VVIFNSLHPR YSFARLDSDQ RVIEAAEKNP ISPHAIAGMY WFKSGSLFVS AAKEMIRKDA RVNDHFYIAP ALNELVLLHK KIGAYRIEPR QYRPLKTQNQ LHAFEMADIR
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