Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0688 |
Symbol | |
ID | 1182308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 742894 |
End bp | 743343 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637392063 |
Product | lipoprotein, putative |
Protein accession | NP_790535 |
Protein GI | 28867916 |
COG category | [S] Function unknown |
COG ID | [COG3126] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTTAC GCCCCCTTTT TTTACTCGGC CTCATCGGTT TGCTGGCCGC ATGCAGCAGC AATGACGCCC CGAAACCTGT CGCCGCGCCG CCCGTGGCGC CAGCGATCAA GCTGCCGGCC GGGCCGGGTC CGTTGCTGCC TTATCAGCGT GAGCTCAGCG GGCAATTGCT GGGCGTCCCG GCCGGTGCCG AGGTCGAACT GGCGATGCTG GTGATCGACG ATCGCGGTCG TCCGCAAAAA CTGCTGACCA GCACCCTGCT CAAGGGCAAC GGCCAGTCGC TGCCGTTTCA GTTGCGCTTC AACCCTGAAG CCTTTCCGGT GGGCGGACGC GTAGAATTGC GCGGCCGCGC GAGCAAATCA GGACAGTTGA TTCTGCACCT GCCATCAATG CGCATCGAAC AGGCCACCAC TCAGGCACTG GGGCAATTGC AGTTCGTCAA GGCGCCATGA
|
Protein sequence | MTLRPLFLLG LIGLLAACSS NDAPKPVAAP PVAPAIKLPA GPGPLLPYQR ELSGQLLGVP AGAEVELAML VIDDRGRPQK LLTSTLLKGN GQSLPFQLRF NPEAFPVGGR VELRGRASKS GQLILHLPSM RIEQATTQAL GQLQFVKAP
|
| |