Gene PSPTO_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0688 
Symbol 
ID1182308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp742894 
End bp743343 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID637392063 
Productlipoprotein, putative 
Protein accessionNP_790535 
Protein GI28867916 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAC GCCCCCTTTT TTTACTCGGC CTCATCGGTT TGCTGGCCGC ATGCAGCAGC 
AATGACGCCC CGAAACCTGT CGCCGCGCCG CCCGTGGCGC CAGCGATCAA GCTGCCGGCC
GGGCCGGGTC CGTTGCTGCC TTATCAGCGT GAGCTCAGCG GGCAATTGCT GGGCGTCCCG
GCCGGTGCCG AGGTCGAACT GGCGATGCTG GTGATCGACG ATCGCGGTCG TCCGCAAAAA
CTGCTGACCA GCACCCTGCT CAAGGGCAAC GGCCAGTCGC TGCCGTTTCA GTTGCGCTTC
AACCCTGAAG CCTTTCCGGT GGGCGGACGC GTAGAATTGC GCGGCCGCGC GAGCAAATCA
GGACAGTTGA TTCTGCACCT GCCATCAATG CGCATCGAAC AGGCCACCAC TCAGGCACTG
GGGCAATTGC AGTTCGTCAA GGCGCCATGA
 
Protein sequence
MTLRPLFLLG LIGLLAACSS NDAPKPVAAP PVAPAIKLPA GPGPLLPYQR ELSGQLLGVP 
AGAEVELAML VIDDRGRPQK LLTSTLLKGN GQSLPFQLRF NPEAFPVGGR VELRGRASKS
GQLILHLPSM RIEQATTQAL GQLQFVKAP