Gene PSPTO_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0680 
Symbol 
ID1182300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp736819 
End bp737343 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID637392055 
Productlipoprotein, putative 
Protein accessionNP_790527 
Protein GI28867908 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGGC GCATGCTACT CACTTTGCTG CTCTCGGTTA CCACTCAGGT GTGGGCCGCC 
GAGCCGCGTG AACTGACCTG GAATGACATG ATTCCGCCCG ATGCACCCGT GGTGAAGCCG
GTAACGGCGC CCATACACGA TATGTCCAAG CTATCCGATG CACTGGCCAT GGAGGCAGCG
CCTGCGGCCC ATCAACTGGC ACCGCATGCG CCGGTGGTCA AGGCACTGGA TGGCAAACTG
GTGCGTTTAC CGGGCTACAT CGTGCCGCTT GAGGTCAGTG AGGAAGGCAG AGTGACGGAG
TTTTTGCTGG TGCCGTATTT CGGCGCCTGC ATCCATGTGC CGCCGCCGCC AGCGAACCAG
ATCGTGCATG TCACGAGTGA GCTGGGCGTG AAGGTCGATG AGCTGTATCA GCCGTACTGG
ATCGAAGGAC CGATGCAGGC CAAGTCGTCG ACCAGCGAAC TGGCAGAAGC GGGTTATCAG
ATGCAGGCAG ACAAGATTCT TGTCTACGAG TTGCCGGATT CATAA
 
Protein sequence
MMRRMLLTLL LSVTTQVWAA EPRELTWNDM IPPDAPVVKP VTAPIHDMSK LSDALAMEAA 
PAAHQLAPHA PVVKALDGKL VRLPGYIVPL EVSEEGRVTE FLLVPYFGAC IHVPPPPANQ
IVHVTSELGV KVDELYQPYW IEGPMQAKSS TSELAEAGYQ MQADKILVYE LPDS