Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0680 |
Symbol | |
ID | 1182300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 736819 |
End bp | 737343 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392055 |
Product | lipoprotein, putative |
Protein accession | NP_790527 |
Protein GI | 28867908 |
COG category | [S] Function unknown |
COG ID | [COG3495] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGGC GCATGCTACT CACTTTGCTG CTCTCGGTTA CCACTCAGGT GTGGGCCGCC GAGCCGCGTG AACTGACCTG GAATGACATG ATTCCGCCCG ATGCACCCGT GGTGAAGCCG GTAACGGCGC CCATACACGA TATGTCCAAG CTATCCGATG CACTGGCCAT GGAGGCAGCG CCTGCGGCCC ATCAACTGGC ACCGCATGCG CCGGTGGTCA AGGCACTGGA TGGCAAACTG GTGCGTTTAC CGGGCTACAT CGTGCCGCTT GAGGTCAGTG AGGAAGGCAG AGTGACGGAG TTTTTGCTGG TGCCGTATTT CGGCGCCTGC ATCCATGTGC CGCCGCCGCC AGCGAACCAG ATCGTGCATG TCACGAGTGA GCTGGGCGTG AAGGTCGATG AGCTGTATCA GCCGTACTGG ATCGAAGGAC CGATGCAGGC CAAGTCGTCG ACCAGCGAAC TGGCAGAAGC GGGTTATCAG ATGCAGGCAG ACAAGATTCT TGTCTACGAG TTGCCGGATT CATAA
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Protein sequence | MMRRMLLTLL LSVTTQVWAA EPRELTWNDM IPPDAPVVKP VTAPIHDMSK LSDALAMEAA PAAHQLAPHA PVVKALDGKL VRLPGYIVPL EVSEEGRVTE FLLVPYFGAC IHVPPPPANQ IVHVTSELGV KVDELYQPYW IEGPMQAKSS TSELAEAGYQ MQADKILVYE LPDS
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