| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0677 |
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| Symbol | |
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| ID | 1182297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 734058 |
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| End bp | 734936 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392052 |
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| Product | lipopolysaccharide biosynthesis protein, putative |
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| Protein accession | NP_790524 |
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| Protein GI | 28867905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTTA TGCTGTTGGG CGGCGGGAAT GCCCTCGGGC AGGCGCTGAT TCGTCTGGGT
GCCGAGGAAA ACATTGGTTT CCTTGCACCA CGTCCACCGC AAGACGGCTG GGATGCGGCG
AGCCTCACGC AACTGCTTGA CGACACCCGT CCCGATGCCC TGATCAACCT TGCTTACTAC
TTCGACTGGT TTCAGGCGGA GAGTGTCAGC GAAGCGCGTC TGACCCACCA GGAACGCTCT
GTCGAGCGCC TGGCCGAACT GTGTCAGCAC CACAACATTA CGCTGTTCCA GCCTTCCAGC
TATCGAGTGT TCGACGGCTC GCGGGCGACC GCCTACAGCG AAAAAGACGA GCCCGTGCCG
TTGGGTTTGC GCGGCCAGGC GCTGTGGCGT ATCGAACAAA GCGTGCGCGC GACCTGCCCG
CAACATGTGC TGGTACGTTT CGGCTGGCTG CTGGATGACA GCGCCGACGG TGTACTGGGC
CGCTTTCTGT CGCGTGCCAA AGAACCCGGC GAATTGCTGC TGGCCGATGA CCGACGTGGC
AACCCGACAC CGGTCGACGA CGCCGCGCGG GTGATCATTT CGGTGATCAA GCAACTCGAT
TGCGAAGCGC CGTTGTGGGG TACTTACCAC TACGCCGGGC ATGAGGCGAC CACGCCGCTG
GCACTGGGTC AGGCGGTACT CACCGAAGCG CGCCTGCTAC ACCCGCTGGC TATCGAGTCG
CCTACCGCGC AGGCGCATGC CGCGCGTCCC GACGCAGCCG AAGAACCGCA ACACGCGGTG
CTCGCCTGCA AGAAAATTCT CCACACTTTC GGCATCAAGC CCCGCGCCTG GCGGGCCGGC
TTGCCAAGCC TGCTGGATCG GTATTATCGA CATGTCTGA
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| Protein sequence | MRLMLLGGGN ALGQALIRLG AEENIGFLAP RPPQDGWDAA SLTQLLDDTR PDALINLAYY
FDWFQAESVS EARLTHQERS VERLAELCQH HNITLFQPSS YRVFDGSRAT AYSEKDEPVP
LGLRGQALWR IEQSVRATCP QHVLVRFGWL LDDSADGVLG RFLSRAKEPG ELLLADDRRG
NPTPVDDAAR VIISVIKQLD CEAPLWGTYH YAGHEATTPL ALGQAVLTEA RLLHPLAIES
PTAQAHAARP DAAEEPQHAV LACKKILHTF GIKPRAWRAG LPSLLDRYYR HV
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