| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0671 |
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| Symbol | |
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| ID | 1182291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 726055 |
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| End bp | 728361 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392046 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_790518 |
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| Protein GI | 28867899 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC GATCGATACC GCGCGCCTCC CGATTCCCCG TGACGCGTCT CGCGCTGCTG
ATTTCATTGA ACTCACTGTG CCTGATCAGC CCGTTCATTC AGGCCGACGA CAACGTGCCG
GCACCTGTAA CGCCGCCCGC CAGCGACGAT GCCGCAGCCA TGACGCTGGG CACCGTTTCG
GTCATCGGTC AGGGCGAAAC ACGCCAGGTA CAGCGCGTGA CACAAAAGGA TGTGAAGGCT
TACTCCGCAG GCACCAGCCC GATGAAAATC CTGCAACGCC TGCCGGGCGT CAACTTCCAG
TCTGGCGACC CGCTGGGCCG CGAAGAAGGC GGCCAGCGCA TCAGCCTGCG CGGCTTTGAC
ATGCACCACC TGGGCTACAC ACTGGACGGC GTGACGCTGG GCAACATGAG CTTCGGCAAC
TTCAACGGCC TGAGCATTAC CCGGGCGATC ATCGCGGAAA ACATCGCAGC CAGTGAAGTA
GCGCCCGGCA TCGGCTCGCT GGGGACAGCG TCGAACAGCG ACCTGGGCGG CACCCTCCAG
TTCACCAGTT CCAACCCGGA CAAGGCGTTC GGCGCACGGC TGTCACAGAC TCTGGGCAGC
TACGACACTT CACGCACGTT CATGCGTGTC GACACGGGCG AATACAACGG CCTGTCGGCC
TACGTGTCTG GAGAGAAATA CGACGCCGAT GCCTGGAAAG GCCACAACAA CCCGCAAAAA
TCCGACGCCG TGAACGCCAA GATCAACTAC AACTTCGGCG ACAACCGCGT GAGCTTTTTT
CACAGCACCT CGTCCCACGA CGAAGCCAAC CTGCCGTCGC TGTCGCCAAG CATCATCCAG
CGGCTAGGCT ACAACTGGAG CTACTACACG CCGGACTGGA CGCGCGCGGT CAACGCGGCC
AATGGCATTT ATACCGGCGG CGTGACCAGC GCAGGCGATG CAACCTACAA CGCCAGCAGC
CTGCGCGATG ACGAACTGGA CATCCTCAAC GGCAACTTCT CGCTGACCGA TGACCTGGTG
CTGGACGCCA CGGTCTATCA CCACCACGAC TCGGGCCGGG GCAACTCCTA TTATCCGTTT
GTCTACACCA GCGGCGCTAC CACCGTGCCC AGCAACGCAA TTCGCAGCAC GGTTTACGGC
ATCGACCGAA CCGGCTTTCA GAGTTCGCTG ACCTACTTCC TGGGCCAGCA CGAAATTCAG
GCCGGGTTCT GGATTCAATC GAACAAGAAC GACATTGCCC GTTATCTGTT CGATACCACC
AATGCGACGC CGCAAAACCA TATCGTCAAA ACCAACGGCC TGCCGCTGGC GGCCACCGTG
CTGGACCAGA GTTACAACGA CCTGACACGA CAGTTCTACC TGCGTGACAC CTACACCCTC
CTTGATGACC GGCTCAAACT TGAGTTCGGC GCAAAAAATA CCGTGACCAC CTCGACAGCC
AAAGGCAAAG GTGGCGGTTA TGCCAGCGGC TCGCTGGAAG CGCGTGACAG ATTTCTGCCG
CAGGTCGGCG CGACCTACAA ACTCAACGAC AGCGATGAAG TGTTCACCTC TTACTCGGAA
AACATGGCGG CTTTTCCGAG TGGCGGTTAC AGCCCGTTCT TCACCACACA GACTGCAGTC
GATGCGCAGA ACGGCTTCAA GGACCTGAAA CCCGAAACCT CGAAAACCGT CGAACTGGGC
CTGCGCCGCA GCACCAAGCT GTATTCGGCC TCCGCCGCGG TCTACAACAC CAGGTTCGAC
AACCGCCTGG TGGCGATCAC CAACTGCACC GGCATCGTCA TCTGCCAGAA CGGCGTGGCC
AACGTCGGCT CGGTGACCAG TCGAGGCCTG GAGCTGTCAT TGGGCCTGAC GCCCAATGAA
AACTGGCGCT GGTCCAACTC GATGTCCTAC AACCACAGCA CTTACGACGA TGACTACGCC
AGTGGCGGCA GCACCGTGCA GGTGAAAGGC AAGACCGTCG TCGATACACC GAAACTCATG
TATTCGAGCA GCCTGGACTG GAACTGGGAA CACTGGAACG CTGGCCTGCA AGGCAACTAC
ATCAGCAAGC GCTATTACAC CTACACCAAT GACTCCAGCG TCAGTGGCTA CTGGCTGGCG
AACGCCAACC TCGGTTACGA CTGCGGCAAA CTCGGCGCCC TGAAAGACAC CACCGTCTCG
CTGAACATGG TCAACCTGTT TGACAAACGC TACATCTCCA CCCTCAACAC AGACGCCAGT
GCGGCTGCCG ATCCGTCAGG CAATTTGCAG ATTCTGCAGG TAGGCACGCC GCGCAGCGCG
TTTGTGACGT TGGGGGTGAA GCTTTGA
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| Protein sequence | MSIRSIPRAS RFPVTRLALL ISLNSLCLIS PFIQADDNVP APVTPPASDD AAAMTLGTVS
VIGQGETRQV QRVTQKDVKA YSAGTSPMKI LQRLPGVNFQ SGDPLGREEG GQRISLRGFD
MHHLGYTLDG VTLGNMSFGN FNGLSITRAI IAENIAASEV APGIGSLGTA SNSDLGGTLQ
FTSSNPDKAF GARLSQTLGS YDTSRTFMRV DTGEYNGLSA YVSGEKYDAD AWKGHNNPQK
SDAVNAKINY NFGDNRVSFF HSTSSHDEAN LPSLSPSIIQ RLGYNWSYYT PDWTRAVNAA
NGIYTGGVTS AGDATYNASS LRDDELDILN GNFSLTDDLV LDATVYHHHD SGRGNSYYPF
VYTSGATTVP SNAIRSTVYG IDRTGFQSSL TYFLGQHEIQ AGFWIQSNKN DIARYLFDTT
NATPQNHIVK TNGLPLAATV LDQSYNDLTR QFYLRDTYTL LDDRLKLEFG AKNTVTTSTA
KGKGGGYASG SLEARDRFLP QVGATYKLND SDEVFTSYSE NMAAFPSGGY SPFFTTQTAV
DAQNGFKDLK PETSKTVELG LRRSTKLYSA SAAVYNTRFD NRLVAITNCT GIVICQNGVA
NVGSVTSRGL ELSLGLTPNE NWRWSNSMSY NHSTYDDDYA SGGSTVQVKG KTVVDTPKLM
YSSSLDWNWE HWNAGLQGNY ISKRYYTYTN DSSVSGYWLA NANLGYDCGK LGALKDTTVS
LNMVNLFDKR YISTLNTDAS AAADPSGNLQ ILQVGTPRSA FVTLGVKL
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