| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0508 |
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| Symbol | |
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| ID | 1182117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 555873 |
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| End bp | 557705 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391875 |
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| Product | hypothetical protein |
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| Protein accession | NP_790356 |
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| Protein GI | 28867737 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAA CTCACGCCTC ATCGCAAAAT CTTCCTGACA CCCTGACCGC CGCACAGGCG
GTCGCCGCTG GCGTTGACTT CGCCGAGCTG GACGTCAGTT CGGCGGGCCT GTTCTGGAAC
GAATACCGCC CCGAAGACGG CGCATGTCGC ATCTGGCACT GGTACGCCAA CAGCAAGCAC
TGCCTGACGC CGCAAGGCTT CAGTGTGCGC AGCCGGGTGT ACGAGTACGG CGGCGGCTCG
TTCTGCCTGG CTGACGATGC CGTGGTGTTC GTCAACGAGC GCGATCAACA GCTGTACCGC
CAGGCGCTGG ACGCCAGCGT GCCGGTTGCG CTGACTCAGG GCGACAAACG CTATGGCGGC
GTGTTCTTCA GCAATGGCCA GGTACTCGCC GTCGAAGAAG ACCACAACAC CCATAGACTG
GTCGCTATCA ATCTGGCTGA CGGGCAGCGC GTGTTGCTGG CCGAAGGCGC TGATTTCTAT
GCCTCGCCGA TCGTCAGTGC CAACGGCAAG CGCCTGGCCT GGATCGAATG GCAGCGCCCG
CATCAACCGT GGACCCGCAG CCGCCTGATG TGTGCGGCAA AGCAGGACGA TGGCCAATGG
GGCGTCGCCG TGTGCATTGC AGGCGACGGC GCTGAAGAAT CCCTGCAGCA ACCTCGTTTT
GATGCCCGGA GTCGCTTGTA TTGCCTGACC GACCGCGCCG GGTTCTGGCA GCCGTGGGGC
GAAACACCGT CCGGGTTTGC TGCGCTTCCT GCCGCCTCCG CCGATCATGC GTCTGCACCC
TGGCAACTGG GCAGTTGCAC CTGGCTGCCG ATCAATGACG GCTATCTGGC CAGTTGGTCG
CAGGACGGTT CAGGGGTATT GGGGCTTTGT CAGGCTGATG GCTCAACAGA GGATTTCAGC
GTTGGTTACA GCCGCTTTCG CAGCCTCGCG GTTGACGAAG AGTTTGTCTA TTGCATCGCC
GCTTCGGCCG TGAGCACGGC GGCAGTGCTG GCCATTTCCC GCGCCGATCA CAGCGTGCAC
GTGCTGGCAG GCGGTGGCTC CCCGCTGCCT GCCGAACTGA TCAGCCGCCC GCAGGCGCTG
TGCTATCCCA GCGGCGGAGC CGAGGCCTAT GGCTATTTCT ATCCGGCCAT GACGGGTGCG
CAAAAGCCGC CGTTGGTGGT CTTCATCCAC GGCGGCCCGA CCTCAGCCTG TTACCCGGTA
CTCGACCCGC GCATTCAATA CTGGACGCAT CGCGGCTTTG CCGTTGCAGA CCTCAATTAT
CGCGGCAGCA GCGGCTACGG ACGCGCCTAT CGCCAAGGCC TGCACCTGAC CTGGGGCGTG
GCGGATGTGC AAGACGCTTG CGCCGTGGTC ACGCATCTGG CCGAGCGCGG CTTGATTGAC
GAACAACAGG CCTTCATCCG TGGCGGCAGC GCTGGCGGTT ACACCACGCT GTGCGCACTG
GCCTTCGAGG ACGTGTTTCG CGCAGGGGCC AGCCTGTATG GCGTCAGCGA TCCGGTCGCA
CTGGCCAAGG CAACGCATAA GTTCGAGGGC GATTATCTGG ACTGGCTGAT CGGCGACCCG
GTAACAGACA TCGAACGCTA CGAGGCACGC ACGCCTTTGC TACATGCAAA TCTAATCAGC
GTGCCGGTGA TTTTCTTCCA GGGCGAACTG GACGCCGTGG TGGTGCCGGA GCAGACCCGC
GCCATGCTCA AGGCTCTGCA GGACAACGGC ATCAAGGCCG AAGGGCACTT TTACCCGGAC
GAGCATCATG GCTTCCGCAA GGCACATAAC CAGGCAGATG CGTTGGAGAA AGAGTGGCGT
TTTTACCGGG ACGTGCTTGA TCAGGCCGTG TGA
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| Protein sequence | MTETHASSQN LPDTLTAAQA VAAGVDFAEL DVSSAGLFWN EYRPEDGACR IWHWYANSKH
CLTPQGFSVR SRVYEYGGGS FCLADDAVVF VNERDQQLYR QALDASVPVA LTQGDKRYGG
VFFSNGQVLA VEEDHNTHRL VAINLADGQR VLLAEGADFY ASPIVSANGK RLAWIEWQRP
HQPWTRSRLM CAAKQDDGQW GVAVCIAGDG AEESLQQPRF DARSRLYCLT DRAGFWQPWG
ETPSGFAALP AASADHASAP WQLGSCTWLP INDGYLASWS QDGSGVLGLC QADGSTEDFS
VGYSRFRSLA VDEEFVYCIA ASAVSTAAVL AISRADHSVH VLAGGGSPLP AELISRPQAL
CYPSGGAEAY GYFYPAMTGA QKPPLVVFIH GGPTSACYPV LDPRIQYWTH RGFAVADLNY
RGSSGYGRAY RQGLHLTWGV ADVQDACAVV THLAERGLID EQQAFIRGGS AGGYTTLCAL
AFEDVFRAGA SLYGVSDPVA LAKATHKFEG DYLDWLIGDP VTDIERYEAR TPLLHANLIS
VPVIFFQGEL DAVVVPEQTR AMLKALQDNG IKAEGHFYPD EHHGFRKAHN QADALEKEWR
FYRDVLDQAV
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