| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0488 |
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| Symbol | |
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| ID | 1182097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 534434 |
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| End bp | 535228 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391856 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_790337 |
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| Protein GI | 28867718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACGCT CTCCGTTGTT TGCTGCGCAA TTGGCGTTCA CGCTGTTGGT CTGCGCGTTC
ATGCTGGTGC CGGTGGTGCT GTCGCTGCTG GCCGGCGTGA CCCGCAATTA TTTTCTGGGC
CTGTCGAGCG GTTTGACCTT CGACTGGCTG GTACAGGTCT GGCAGGGCTA TTCGCCGACC
GTCTGGCTGT CGCTGCAATT GGCGGTGGCC TGCGCGATCT GCGTGTGCCT GGTCGGCGTT
CCGGCGGCGT ATGCGCTGGT ACGCATGAAC AATCGCTTCA GCCGTGCATT TGAAGAGCTG
ATGGTGCTGC CGGTCGCCAT GCCTGGCCTT GCCAGCGCGC TGGCGTTATT GCTGACCTAC
GGCCAGTTCG GCAGCTTTCG CAGCAGTTGG CTGTTCATTC TGGTGGGCCA CGTGCTGTTC
ACGTTGCCGT TTCTGGTGCG CCCGGTGATG GCGGTCATGC AGCGTCAGCA GTTGCCGGTG
CTCGAGGAGG CCGCGGCCAG TCTTGGGGCC GGGCCGATCA AGCGTTTTTT CAGCGTGGTG
GTGCCGAACT GCCGGGCCGG GATTCTGGCC GGTGTGTTGA TGGTTGTGAC CCTGTCGCTG
GGTGAATTCA ACCTGACCTG GATGCTCCAC ACGCCGATGA CCAAGACCCT GCCGGTCGGC
CTGGCCGACA GTTATGCCTC GGCCCGGCTG GAAGTCGCCA GCGCCTACAC CCTTCTTTTT
CTGTTGCTGA TTGTGCCGCT GCTGATTGCG TTGCAGGCCA TCAGCGCGCG TCTTGCCCGT
GGAGAGAGCC GATGA
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| Protein sequence | MKRSPLFAAQ LAFTLLVCAF MLVPVVLSLL AGVTRNYFLG LSSGLTFDWL VQVWQGYSPT
VWLSLQLAVA CAICVCLVGV PAAYALVRMN NRFSRAFEEL MVLPVAMPGL ASALALLLTY
GQFGSFRSSW LFILVGHVLF TLPFLVRPVM AVMQRQQLPV LEEAAASLGA GPIKRFFSVV
VPNCRAGILA GVLMVVTLSL GEFNLTWMLH TPMTKTLPVG LADSYASARL EVASAYTLLF
LLLIVPLLIA LQAISARLAR GESR
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