Gene PSPTO_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0472 
Symbol 
ID1182081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp517608 
End bp518000 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID637391840 
Productresponse regulator 
Protein accessionNP_790321 
Protein GI28867702 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCGC CTGATCGCGG CGCACCGCAA CGGGTCCTGA TCGTTGATGA CGACAGTGAC 
GCGCGCGAGC TGCTGGCCGA GATTCTGAGT CTCAATGACA TCAGTTGCAT GACTGCGCCC
GGTGGTGACA GCGCCCTCAA AATGATTCAG ACGCGCCAGT CTATAGGCCT GTTGATCACC
GATTTGCGCA TGGCGCCTTT CGACGGTCTT GACCTGATCC GCAAGGTCCG CGAGTCGGAC
CGCGCCGAGT TGCCCATCAT TATCGTTTCC GGCGACGCCA ACGTGCGCGA CGCCATCGAC
GCCATGCACC TGAGCGTGGT GGACTTCCTG CTCAAGCCGT TGAACACCAA ACAACTGGTG
AAGCTGGTGA AGCGTGAGCT GGGAATGAGT TGA
 
Protein sequence
MLSPDRGAPQ RVLIVDDDSD ARELLAEILS LNDISCMTAP GGDSALKMIQ TRQSIGLLIT 
DLRMAPFDGL DLIRKVRESD RAELPIIIVS GDANVRDAID AMHLSVVDFL LKPLNTKQLV
KLVKRELGMS