Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0472 |
Symbol | |
ID | 1182081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 517608 |
End bp | 518000 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391840 |
Product | response regulator |
Protein accession | NP_790321 |
Protein GI | 28867702 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCGC CTGATCGCGG CGCACCGCAA CGGGTCCTGA TCGTTGATGA CGACAGTGAC GCGCGCGAGC TGCTGGCCGA GATTCTGAGT CTCAATGACA TCAGTTGCAT GACTGCGCCC GGTGGTGACA GCGCCCTCAA AATGATTCAG ACGCGCCAGT CTATAGGCCT GTTGATCACC GATTTGCGCA TGGCGCCTTT CGACGGTCTT GACCTGATCC GCAAGGTCCG CGAGTCGGAC CGCGCCGAGT TGCCCATCAT TATCGTTTCC GGCGACGCCA ACGTGCGCGA CGCCATCGAC GCCATGCACC TGAGCGTGGT GGACTTCCTG CTCAAGCCGT TGAACACCAA ACAACTGGTG AAGCTGGTGA AGCGTGAGCT GGGAATGAGT TGA
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Protein sequence | MLSPDRGAPQ RVLIVDDDSD ARELLAEILS LNDISCMTAP GGDSALKMIQ TRQSIGLLIT DLRMAPFDGL DLIRKVRESD RAELPIIIVS GDANVRDAID AMHLSVVDFL LKPLNTKQLV KLVKRELGMS
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