| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0470 |
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| Symbol | |
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| ID | 1182079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 514680 |
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| End bp | 515393 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391838 |
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| Product | exonuclease, putative |
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| Protein accession | NP_790319 |
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| Protein GI | 28867700 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGT TCGAGTGGTT GAAGCCACGT CCGAAAAAGG TCCCTTTGGA CGCTCATCAA
CTGAAGCGGA TCAAGCAATT GCCGGTCTGC GCGAAGCTCA GCGACAAACC GCTGCGCCAA
CAGCGCTGGG TGGTGCTGGA CCTGGAAACC AGCGGGCTGA ACATGAACCG CGATCAGGTG
CTGTCCATCG GAGCGGTTGT GATTGAGGAC GGAGCCATCG ATCTGGGCCA GCAGTTCGAG
CGCACGCTGT TGCGCGTCGA TCACAAGCTC AGCCCGGCCG TGCTGATTCA TGGGCTGGCA
CCCAGTGCGA TTGCAGCGGG CAGCGAGCCG GTCGAGGCGT TGCTGGATTT CATGGAGTTT
GTCGGCGACA GCCCGATTCT GGGCTTTCAT GCACCATTCG ATCAGCACAT GCTGGCGCGT
GCGCTGAAAG AAAGCCTGGA CTACCGTTTG CAGCATGCGT TTTTCGACGC CGCCGAAATA
GCCCCGATGC TCTGCGAACA GGCCAACCTG CGGCACGCCG GGCTGGACGA CTGGACGCAG
TTTTTTGGCC TGCACGCCGA AGAACGCCAC AACGCCAGCG CCGATGCACT GGTCACCGCA
GAGCTGGCGT TGATTCTGTT CAGCCACGCC CGCCGCCAGC AGATCGACAG CACCTTGCGA
CTGGCAGAAT CACTGGGGCA GTGGCGCAGG CGCAAGCAGT CGCATTCGTT CTGA
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| Protein sequence | MNLFEWLKPR PKKVPLDAHQ LKRIKQLPVC AKLSDKPLRQ QRWVVLDLET SGLNMNRDQV
LSIGAVVIED GAIDLGQQFE RTLLRVDHKL SPAVLIHGLA PSAIAAGSEP VEALLDFMEF
VGDSPILGFH APFDQHMLAR ALKESLDYRL QHAFFDAAEI APMLCEQANL RHAGLDDWTQ
FFGLHAEERH NASADALVTA ELALILFSHA RRQQIDSTLR LAESLGQWRR RKQSHSF
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