Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0456 |
Symbol | purU-1 |
ID | 1182065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 499114 |
End bp | 499971 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391824 |
Product | formyltetrahydrofolate deformylase |
Protein accession | NP_790305 |
Protein GI | 28867686 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCG CCCCGGACAC GTGGATTCTG ACAGCCGACT GCCCCAGCAT GCTGGGCACA GTAGACGCGG TGACCCGCTT TCTGTTCGAG CAGGGCTGCT ATGTCACCGA GCACCACTCC TTCGATGATC GCCTGTCGGG GCGGTTCTTC ATTCGCGTGG AATTTCGTCA GCCTGACGCC TTCGACGAGC AGGCATTTCG TGAAGGGCTG ACTGAACGCG GCGAGACGTT CGGCATGATC TTCGAACTCA CAGCGCCCAA CTACAGGCCA AAAGTGGTGA TCATGGTTTC AAAAGCCGAT CACTGCCTGA ACGACCTGCT CTATCGCCAA CGCATCAACC AGTTGTCAAT GGACGTGGTC GCGGTGGTGT CCAACCACCC GGATCTCGAA CCGCTCGCTG GCTGGCACGG AATTCCGTAC TACCATTTCC CTCTGGACCC GAACGACAAG CCTGCGCAGG AAGCCAAGGT CTGGCAGGTG ATCGAGGAGT CCGGTGCTGA ACTGGTGATC CTCGCCCGCT ACATGCAGGT GCTGTCACCG GAGCTGTGCC GCAAGCTGGA TGGCAAGGCG ATCAATATCC ATCACTCCTT GCTGCCCGGT TTCAAAGGCG CCAAACCGTA CCATCAGGCC TACGAAAAAG GCGTGAAACT GGTGGGTGCC ACGGCGCATT ACATCAACAA CGATCTGGAC GAAGGCCCGA TCATTGCCCA AGGCGTCGAA GTGGTCGATC ACAGCCACTA CCCCGAAGAC CTGATTGCCA AGGGTCGGGA CATCGAAGGG CTGACACTGG CCCGCGCGGT GGGTTATCAC ATCGAACGAC GGGTGTTTCT CAACGCCAAC AGGACGGTGG TTCTGTAG
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Protein sequence | MSRAPDTWIL TADCPSMLGT VDAVTRFLFE QGCYVTEHHS FDDRLSGRFF IRVEFRQPDA FDEQAFREGL TERGETFGMI FELTAPNYRP KVVIMVSKAD HCLNDLLYRQ RINQLSMDVV AVVSNHPDLE PLAGWHGIPY YHFPLDPNDK PAQEAKVWQV IEESGAELVI LARYMQVLSP ELCRKLDGKA INIHHSLLPG FKGAKPYHQA YEKGVKLVGA TAHYINNDLD EGPIIAQGVE VVDHSHYPED LIAKGRDIEG LTLARAVGYH IERRVFLNAN RTVVL
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