Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0436 |
Symbol | |
ID | 1182045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 479967 |
End bp | 481025 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637391804 |
Product | hypothetical protein |
Protein accession | NP_790285 |
Protein GI | 28867666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCG CGCCAAAATT GCTGGCTGTT GCACTCTGCG CCGGGCTTGC CAGCCAGGCT TTTGCTGCCA CCCAATTGAA GCATTGGCCC GAGCCTGCCG CCAAGGCACT TGACGCGATG ATTGCCGCGA ATGCCAACAA GGGCAATTAC GCGGTCTTCG ACATGGACAA CACCAGCTAC CGCTTCGACC TTGAAGAGTC GCTGCTGCCG TACATGGAAA ACAAAGGCCT GATCACCCGC GAAACCCTTG ACCCGTCCCT GAAACTGATC CCCTTCAAAG ACACCGCCGA ACACAAGGAA AGCCTGTTCA GTTACTACTA TCGCCTATGC GAACTCGACG ACATGGTCTG CTACCCGTGG GTGGCGCAGG TGTTTTCCGG CTTCACGCTT CAGGAACTCA AAGGCTACGT CGATGAGCTG ATGGCCCTGA AAAAGCCGAT CCCTGCGACC TATTACGACG GCGATACCGT CAAGCAGCTC AATGTCGAGC CGCCACGCGT GTTCACCGGG CAGACCGAGC TGTACAACAA GCTGATGGAA AACGGCATCG AGGTCTATGT AATGACCGCC GCGTCCGAAG AGCTGGTGCG CATGGTCGCC GCCGATCCCA AGTACGGCTA CAACGTCAAA CCGCAGAACG TGATCGGCGT CACCACGCTG CTCAAGGACC GCAAGACTGG CGAATTGACC ACCGCGCGCA AGCAGATCAC CGCGGGCAAA TACGATGCGA AAAGCAACAT GGGCCTGGAG CTGACGCCCT ACCTGTGGAC CCCGGCAACC TGGATGGCCG GCAAGCAGGC GGCGATTCTG ACTTACATCG ATCAGTGGAA AAAACCGGTG CTGGTCGGCG GCGATACGCC CACCAGTGAC GGCTACATGC TGTTTCACAG CGTCGATGTG AGCAAAGGCG GCGTGCACTT GTGGATCAAC CGCAAGGACA AGTACATGAC CCAGCTCAAC GGCATGATCA AAGCCAATGC CGAAGCTCAG GCCAAGGAGA AGTTGCCGGT GACGGCAGAC AAGAACTGGG TCATCGTCAA GCCGGACGAG ATTCAGTAA
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Protein sequence | MKFAPKLLAV ALCAGLASQA FAATQLKHWP EPAAKALDAM IAANANKGNY AVFDMDNTSY RFDLEESLLP YMENKGLITR ETLDPSLKLI PFKDTAEHKE SLFSYYYRLC ELDDMVCYPW VAQVFSGFTL QELKGYVDEL MALKKPIPAT YYDGDTVKQL NVEPPRVFTG QTELYNKLME NGIEVYVMTA ASEELVRMVA ADPKYGYNVK PQNVIGVTTL LKDRKTGELT TARKQITAGK YDAKSNMGLE LTPYLWTPAT WMAGKQAAIL TYIDQWKKPV LVGGDTPTSD GYMLFHSVDV SKGGVHLWIN RKDKYMTQLN GMIKANAEAQ AKEKLPVTAD KNWVIVKPDE IQ
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