Gene PSPTO_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0436 
Symbol 
ID1182045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp479967 
End bp481025 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content57% 
IMG OID637391804 
Producthypothetical protein 
Protein accessionNP_790285 
Protein GI28867666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCG CGCCAAAATT GCTGGCTGTT GCACTCTGCG CCGGGCTTGC CAGCCAGGCT 
TTTGCTGCCA CCCAATTGAA GCATTGGCCC GAGCCTGCCG CCAAGGCACT TGACGCGATG
ATTGCCGCGA ATGCCAACAA GGGCAATTAC GCGGTCTTCG ACATGGACAA CACCAGCTAC
CGCTTCGACC TTGAAGAGTC GCTGCTGCCG TACATGGAAA ACAAAGGCCT GATCACCCGC
GAAACCCTTG ACCCGTCCCT GAAACTGATC CCCTTCAAAG ACACCGCCGA ACACAAGGAA
AGCCTGTTCA GTTACTACTA TCGCCTATGC GAACTCGACG ACATGGTCTG CTACCCGTGG
GTGGCGCAGG TGTTTTCCGG CTTCACGCTT CAGGAACTCA AAGGCTACGT CGATGAGCTG
ATGGCCCTGA AAAAGCCGAT CCCTGCGACC TATTACGACG GCGATACCGT CAAGCAGCTC
AATGTCGAGC CGCCACGCGT GTTCACCGGG CAGACCGAGC TGTACAACAA GCTGATGGAA
AACGGCATCG AGGTCTATGT AATGACCGCC GCGTCCGAAG AGCTGGTGCG CATGGTCGCC
GCCGATCCCA AGTACGGCTA CAACGTCAAA CCGCAGAACG TGATCGGCGT CACCACGCTG
CTCAAGGACC GCAAGACTGG CGAATTGACC ACCGCGCGCA AGCAGATCAC CGCGGGCAAA
TACGATGCGA AAAGCAACAT GGGCCTGGAG CTGACGCCCT ACCTGTGGAC CCCGGCAACC
TGGATGGCCG GCAAGCAGGC GGCGATTCTG ACTTACATCG ATCAGTGGAA AAAACCGGTG
CTGGTCGGCG GCGATACGCC CACCAGTGAC GGCTACATGC TGTTTCACAG CGTCGATGTG
AGCAAAGGCG GCGTGCACTT GTGGATCAAC CGCAAGGACA AGTACATGAC CCAGCTCAAC
GGCATGATCA AAGCCAATGC CGAAGCTCAG GCCAAGGAGA AGTTGCCGGT GACGGCAGAC
AAGAACTGGG TCATCGTCAA GCCGGACGAG ATTCAGTAA
 
Protein sequence
MKFAPKLLAV ALCAGLASQA FAATQLKHWP EPAAKALDAM IAANANKGNY AVFDMDNTSY 
RFDLEESLLP YMENKGLITR ETLDPSLKLI PFKDTAEHKE SLFSYYYRLC ELDDMVCYPW
VAQVFSGFTL QELKGYVDEL MALKKPIPAT YYDGDTVKQL NVEPPRVFTG QTELYNKLME
NGIEVYVMTA ASEELVRMVA ADPKYGYNVK PQNVIGVTTL LKDRKTGELT TARKQITAGK
YDAKSNMGLE LTPYLWTPAT WMAGKQAAIL TYIDQWKKPV LVGGDTPTSD GYMLFHSVDV
SKGGVHLWIN RKDKYMTQLN GMIKANAEAQ AKEKLPVTAD KNWVIVKPDE IQ