| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0409 |
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| Symbol | |
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| ID | 1182018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 455239 |
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| End bp | 456681 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391777 |
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| Product | TldD/PmbA family protein |
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| Protein accession | NP_790258 |
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| Protein GI | 28867639 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATT TCTCCGCCCG GCTCAAGCAG CATTTCGCTG CTTTGCAGAG TGAAGCGCAA
TTCTTTTCCG TACGTTACGT GCGCCGCACC GGCCAACGCT TGTGTGTGCG CAAGAACGTG
GCCGAGCCAC CGTCGCTAAG CAGCGATGAA GGCGCAATGC TGACTGTGCG CCTCAATGGC
GTTGAAGCCT ACGCCGCCAC CAACGACACT TCCCGCCAGG GTTTGCAGGC CGCATTGCAG
CAGGCCGAGG CACTGGCCCG CCGACTGGCA CCACACGCCT TGCTGGACCT GAGCGAGCAA
GCCGTTTCAA CCGCCAGGGC TGACTACCTG TCACCGAACA TGGATCAAGC CTTCCCGCCG
TTGAGCGACT GCATTGGCCT GCTGATGGCT GAGTCAAGCG CAGTCCCCAA GGACGAGCGC
CTGGTCAACT GGCAGGCCAT TCTGGGGCTG GAAACCGTCG AGCAGATCTA CCTGAACAGC
GCAGGTGCGC AGCTTCGTCA GGCGCAGCGT TTTGTGTTCC CCGGCATGAG CGTGACCGCT
TACGACGGCC GCGACAGCCA GACGCGTAAC CTGGGCGGCG ACAATTTCGG CCAACAGGGT
GGCATCGAAG TACTGAGCAG TTGCGGGCTG ATTGGCTCAG CTGCAAGGGT GGCCGATGAG
GCCTTGCAGT TGATCCTCGC ACCCAACACG CCAACAGGCC CGCGCGACCT GCTGTTGATG
CCGGATCAGA TGGTCCTGCA AATTCACGAG TCCATCGGCC ATCCGCTGGA ACTGGACCGG
ATTCTGGGCG ACGAGCGTAA TTACGCCGGC ACCAGCTTCG TCAAGACGTC GGATTTCGGC
AGCCTGCAAT ACGGCTCCAG CCTGTTGAAC GTGACCTTCG ACCCGGACAT TCCCGAACAA
CTCGCCAGCT ACGCGCACGA CGACGACGGC ACCCCGGCGA ACAAACAGTT CCTGATTCGC
GACGGCCTGC TGCAGCGTCC GCTCGGTGGC GCGCTGTCGC AGTACCGCAG CGGCCTGGAC
GGCGTTGCCA ACAGCCGCGC CTGTGGCTGG AATCGCGCAC CGATTGATCG CATGGCCAAC
CTGAACATCG AACCGGGCGA CCAGTCGATG GACGGCCTGA TCGGCACTAT CGAGCACGGC
ATCCTGATGT CGAGCAACCG CTCGTGGTCC ATCGACGATG CGCGCAACAA ATTTCAGTTC
GGTTGCGAAT GGGGTCAGTT GATTGAAAAC GGCGAACTCA AGGGCGTGGT GAAAAACCCC
AACTATCGGG CGATCTCCGC GCAATTCTGG AAAAACCTCA GTGCTGTCGG CGATGCCAGC
ACCTTCAAGG TGCTCGGCAC ACCCAATTGC GGCAAGGGCG AGCCCAATCA GGTGATCCGT
GTCGGTCACG CCTCTCCGGC GTGTGTATTT GCCAATGTCG ATGTATTCGG AGGAGACGCC
TGA
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| Protein sequence | MFDFSARLKQ HFAALQSEAQ FFSVRYVRRT GQRLCVRKNV AEPPSLSSDE GAMLTVRLNG
VEAYAATNDT SRQGLQAALQ QAEALARRLA PHALLDLSEQ AVSTARADYL SPNMDQAFPP
LSDCIGLLMA ESSAVPKDER LVNWQAILGL ETVEQIYLNS AGAQLRQAQR FVFPGMSVTA
YDGRDSQTRN LGGDNFGQQG GIEVLSSCGL IGSAARVADE ALQLILAPNT PTGPRDLLLM
PDQMVLQIHE SIGHPLELDR ILGDERNYAG TSFVKTSDFG SLQYGSSLLN VTFDPDIPEQ
LASYAHDDDG TPANKQFLIR DGLLQRPLGG ALSQYRSGLD GVANSRACGW NRAPIDRMAN
LNIEPGDQSM DGLIGTIEHG ILMSSNRSWS IDDARNKFQF GCEWGQLIEN GELKGVVKNP
NYRAISAQFW KNLSAVGDAS TFKVLGTPNC GKGEPNQVIR VGHASPACVF ANVDVFGGDA
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